Htri000850.1
Basic Information
- Insect
- Hirtodrosophila trivittata
- Gene Symbol
- sip1
- Assembly
- GCA_035045065.1
- Location
- JAWNNK010000022.1:7209076-7211755[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-93 5.5e-90 302.0 16.1 1 275 422 693 422 693 0.98 2 2 0.17 9.6e+02 -0.6 0.0 156 201 704 746 698 748 0.60
Sequence Information
- Coding Sequence
- ATGTCGGACAATGAGTACGAACGTTTTGAAATCACAGACTATGATCTGGACAACGAATTCAACATCAACAGGCCGCGAAAACGTCATACAAAACACCAGCAAATTTATGGCATTTGGGCGGATGACAGCGACAATGAAAGTGAAGGCGAGGGTACTGGTCGACGTAGACGCCGTGGATTGGGCGGCGGCGGTGCCAGCAAGTCCAAGGATTACACCGCACCCGTTAGTTTTGTAGCCGGCGGCATACAGCAAGCCGGCAAAAAGCCGCCCAAGAAGAATGAAGAAAACGCGGGAACCGAAGAAGAGGACAGCGATGCGAATGATAGCGATGAGGCGCGTCCATCATTTGGTCGCAAACAACCGCAGTTGACGAACAACAGCGATGCAAACAGCTCAGATACTTCCATGGAGCCAGAGGACCAGTCCCGTCAAGGATCTATGACGGCAAGAAACACGGCAGGACTCAGGCACAACTCCCACATAACAGGCCCACGAAATGTGGGCGCATGGGAGCAACATACGCGTGGCATAGGCgctaagctgctgctgcaaatgGGCTACAAGCCTGGCAAGGGTCTGGGCAAAgatctacagggtatctcgcAGCCAGTGCAGGCACATGTTCGCAAAGGACGCGGTGCCATTGGCGCCTACGGACCAGAAACAGCAGCCAGCATAGGCGGGCAAGCAAAAGCCATCAAGGTAGATGAGGATGTCAAGGAGGCCAAGGAGTTCAAGGAGCAACTAAACAAATGGAAGAAAGGCGGCAACGAACCCCGTGAAAAGTCGGGCAAACGTTACTATTATAAATCCGTAGAGGAGGTCATTGCCAAGGGCAAAAAATCCGATCACTTGCTTTCCGAACAGCTTAGCAAACGCTTGGGCAACGTTCCAGTAATAGATATGACCGGACCTGAGAAACGTGTGCTAAGCGGTTACCATGCGATCGCTCAGAGCAAAATAACACCCGAGGAGACGCTCTACGATGCACAGGGATCAGAGGAAACGGGAGAGAAGAGTGCACCCATTTCCGTTTTTAGTATGCCAGAACTTACCCACAATCTAAACTTGCTTGTAAGCCAATGCGAGCAGGACATCATTGCCATAGACAAGGTGGAGCGTGAGTGCTCAGATCGCCAGGCAGCACTGGAGCAcgagcaccagcagctgcaggaaCTTGTCCAGCTGGAACGGGATCACATGACGACGCTGCAAGGGGCACTCCTACGCCTCGAGCAGCTCAGCGAAAACCCAGACGTTACCCTGGAGCAGGCGGAGCAGTTGtttctgcagctgcagcatgaTTTTACGGCCGAGTACAAAGAGTTTGGACTCGCAGATCTGGCTGCTGGAGTTATTGCTCCACTTCTGAAACGTGAACTAGAGGATTGGCAGCCAGTGGAACACCCAACGCAGCCGCTGCAGCTCATCAAGCGTTGGCATGACATTTTGCAGGCAGACGAACAGGAAGTGTCAGAGCAGCACTCAAGGAATGTCTTCGATCCATACTCTTCGCTTATTTGGGCAGGTGTGATGCCTTCCTTTAGAGCCTGCGCCATTAGCTGGCAGCCAAAAGAATACGCGCCAATGGCAGCACTGCTGGACGTTTGGGCGCCGCTGTTGCCCACCTGGGTACTGGATTCAGTGCTGGAACAGCTGGTGCTGCCGCGCCTGCAAGCGGGCGTGCGCGAATGGGATCCCTTGACTGATACGGTGCCCATACACAGCTGGATATTGCCCTGGCATGGTATATTGGGCGCCAAACTGGAGGAGTCTATATACCCGCAGATACGCAGCAAACTGGGCGCTGCGCTGCAGTCCTGGTCGCCGCAGGATCGCTCAGCACGCGCCATGCTGACGCCCTGGAAGACGGCGTTTCCCGAGGAGCAGTTGGTCCAGTTTCTCTTACACCACATTATACCCAAGCTGCAGGCTGTGCTTGATGACTTTGTGATCAATCCCTTGCAACAGAATCTGGAACTCTGGCATCAGGTGTGGGAGTGGAATGAGCTGATACCCGCCTACTACATGGCACAGCTGTTGGACAAGCATTTCTTTCCACGCTGGATGCAGGTGCTCGTCATGTGGCTCAATCAGTCGCCGGACTTTGTCGAAATCTCGCGCTGGTATGCCGGCTGGAAGAGCATGCTCAGTGAGCCGCTGCTACACGAGCCCTGCATCAAGGAGCATTTGCGTCGCGCTTTGGATATGCTGCACCGTGCTACGGATGCAGTACTCCAGCCAGCACCTGCTCCGCCGCCACCCATTATACCAGCACCTGCGCCTGTACTGCTAACACCTGTGATGCTCGTCGACTTGGTGCCGCAGGCTCAGTTGGAGTTCAAGGAGCTCGTCTCACAGAAATGCGCCGAACTGGGCATTATATTCGCGCCCCTGCCAGGCCGACGAGAACTAGGCAAACAGATCTATCGCGTGGGCAAACTCTTCTGTTATATCGATCGCAATGTCTGCATGCTGAGTGATAGCAGCTTAACGAAATGGCAACCTGTGGCTCTCAATCAAATCCTGGAACGTGCCCAAACTGGCGTCCTCTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRKRHTKHQQIYGIWADDSDNESEGEGTGRRRRRGLGGGGASKSKDYTAPVSFVAGGIQQAGKKPPKKNEENAGTEEEDSDANDSDEARPSFGRKQPQLTNNSDANSSDTSMEPEDQSRQGSMTARNTAGLRHNSHITGPRNVGAWEQHTRGIGAKLLLQMGYKPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGQAKAIKVDEDVKEAKEFKEQLNKWKKGGNEPREKSGKRYYYKSVEEVIAKGKKSDHLLSEQLSKRLGNVPVIDMTGPEKRVLSGYHAIAQSKITPEETLYDAQGSEETGEKSAPISVFSMPELTHNLNLLVSQCEQDIIAIDKVERECSDRQAALEHEHQQLQELVQLERDHMTTLQGALLRLEQLSENPDVTLEQAEQLFLQLQHDFTAEYKEFGLADLAAGVIAPLLKRELEDWQPVEHPTQPLQLIKRWHDILQADEQEVSEQHSRNVFDPYSSLIWAGVMPSFRACAISWQPKEYAPMAALLDVWAPLLPTWVLDSVLEQLVLPRLQAGVREWDPLTDTVPIHSWILPWHGILGAKLEESIYPQIRSKLGAALQSWSPQDRSARAMLTPWKTAFPEEQLVQFLLHHIIPKLQAVLDDFVINPLQQNLELWHQVWEWNELIPAYYMAQLLDKHFFPRWMQVLVMWLNQSPDFVEISRWYAGWKSMLSEPLLHEPCIKEHLRRALDMLHRATDAVLQPAPAPPPPIIPAPAPVLLTPVMLVDLVPQAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDSSLTKWQPVALNQILERAQTGVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- -
- 80% Identity
- -