Dlim017052.1
Basic Information
- Insect
- Drosophila limbata
- Gene Symbol
- sip1
- Assembly
- GCA_963924055.1
- Location
- OZ001353.1:18686547-18689865[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.83 1.2e+04 -3.8 0.1 44 81 239 275 237 286 0.65 2 3 4.2e-97 5.9e-93 312.1 14.7 1 275 430 701 430 701 0.98 3 3 0.56 7.8e+03 -3.2 0.0 245 269 716 740 709 746 0.71
Sequence Information
- Coding Sequence
- ATGTCGGACCAGGAATACGAACGTTTTGAAATCACCGACTATGATCTGGATAATGAGTTCAACATAAACAGACCACGCAGACGCCACACCAAGCATCAGCAAATTTATGGTATTTGGGCGGATGACAGCGACAATGAGAGTGAAGGCGAGAACAGCGGACGGCGTGGACGCCGCGGCTTGGGCGGTGGTTCAGCTGGAAAGTCAAAGGATTACACTGCGCCCGTGAGTTTCGTGGCCGGCGGAATTCAGCAGGCCGgcaagaagcagaagaagaagcaactGGAGGAAAACGCAGACAGCGGCGATGAGAAGGGCAGCAATGCGGATAGCAATGATAGCGATGAGGCGCGTCCTTCATTTGGCCGCAAGCAACCGCAGTTGATGGACAACAGCGATGGCAACAGCTCCGACAGCTCGGCGGGAGCGGAGGAGCGTCAGCATCAGCAGCGTAAGGCGACGATGACATCGTCACGTCAGACAGCCGGACTTAGGCATAATTCGCACATTGCGAGCAATCGGAATGTGGGTGCCTGGGAGCAGCATACGCGCGGTATTGGCGCCAAGTTGCTGCTCCAAATGGGCTACGAGCCCGGCAAGGGTCTAGGTAAGGATCTGCAGGGTATCTCGCAGCCGGTGCAGGCGCATGTGCGTAAAGGACGAGGAGCCATCGGCGCCTATGGGCCAGAAACAGCGCCTAGCGTGGGCGGACAGTCAAAGGCCCTGAAAAACGACGAGGGAGTCCAGGAGACCAAAGAGTCCAAGGAGCAACTCAACAAATGGAGGAAAGGCGGCAACGAGGCTCGCGAAAAGTCGAGCAAGCGATACTACTACAAATCCGTGGAGGAAGTCATTGCCAAGGGCAAGAAATCCGATCACTTGCTGTCGGAAAAGCTGAGCAAGCGGCTCGGCAATGTTCCAGTGATTGATATGACGGGACCAGAGCGACGTGTGCTTAGTGGATATCATGCCCTAGCTCAGAACAAAATTACGCCCGAGGAGACGTTGTATGATGCACAGGGAATGGAGGAGAAGGGGGAGAAGAGCACGGCCGTGTCCGTATTCAGCATGCCCGAACTGACCCACAATCTGCAGCTGCTGGTGAGCCAGTGCGAGCAGGAGATCATTGCCATAGACAAGACAGAGCGGGAGTGTGAGGACCGCCAGGCGGCGTTGGAGCACGAGCAGCATCAGCTGCTGGAACTGGTGCAGCTGGAGCGCAATCACATGACCACGCTTCAAGCGACCCTCGCCCGCCTCGAACAGCTCAGCGAGAACCCGGAGTTGAGTCTGTCGCAGGCGGAACAATTGTTTCTCGAGCTGCAGCACGACTATGCGGCTGAGTACAAAGAATTTGGCTTGGCCGATCTGGCAGCGGGTGTTATAGCGCCGCTCCTGAAGCGAGAACTCAACGATTGGCAACCGTTGCAGGAGCCCACGCAGCCAGTGCAGCTGATCAAACGATGGCGTGGCATATTGCAACCGGATGGACCCGATGTGTCGGAGCAAGAGTCGCGTAATATTTTCGATCCCTACTCCTCGCTGATCTGGGCTGGTGTGATGCCCTCGTTCAGAGCCTGCGCCGCCAGCTGGCAGCCAAAGGAGCATGCCTTAATGGCAGCTCTGCTGGACGCCTGGGCGCCTCTGTTGCCCACTTGGGTGCTTGACTCAGTGCTGGAGCAGCTGGTGCTGCCGCGACTGACAATTGGCGTCAGCGAATGGGATCCCCTGACGGATACTGTGCCCATACACAGCTGGATTCTGCCATGGCATGCCATACTGGGGTCCAAACTGGAGGAGTCCATCTATCCGCAGATTCGAAGCAAGCTGGGCGTTGCCCTGCAGGCCTGGTCACCGCAGGATCGATCAGCACGCGCCATGCTGACGCCCTGGCAAACGGCCTTTGCCGAGGAGCAACTCGTCCAGTTCCTGCTGCGTCACATCATACCCAAGCTGCAGGCGGTGCTCGCTGAGTTCGTGATCAATCCGCTGCAACAGAATCTGGAGTTGTGGCATCAGGTGTGGGAGTGGCACGAGCTCATACCCGCCCACCACATGGCCCAGCTGCTGGACAAACATTTCTTTCCGCGCTGGATGCAGGTGCTCGTCATGTGGCTGAATCAGTCGCCGGATTATGCGGAAATCTCACGCTGGTATGCCGGATGGAAGAGCATGTTCAGTGAGCCGATACTCCGGGAGCCCTGCATCAAGGAGCACTTGCGTCGCGCCCTCGACATGCTGCATCGTGCCACAGATGCCGTGCTGCAAACCACCACAGCACCGCCACCACCCATGCCATCAGCACCAGCGCCTGTCCTCCTCCCACCCGTCATGCTCGTGGACGTGGCGTCACCTGCTCAGCTGGAATTTAAGGAGCTCGTCTCCCAGAAATGCGCCGAATTGGGCATCATATTTGCCCCACTTCCAGGTCGACGGGAACTGGGCAAACAGATCTATCGCGTGGGCAAGCTCTTCTGCTACATCGATCGCAACGTGTGCATGTTGAGCGACAGCAGCTTCACGAATTGGCAGCCCGTGGGACTTAATCAGTTGCTGGAACGGGCACAAACTGGGCTGCTTTAG
- Protein Sequence
- MSDQEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNESEGENSGRRGRRGLGGGSAGKSKDYTAPVSFVAGGIQQAGKKQKKKQLEENADSGDEKGSNADSNDSDEARPSFGRKQPQLMDNSDGNSSDSSAGAEERQHQQRKATMTSSRQTAGLRHNSHIASNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAPSVGGQSKALKNDEGVQETKESKEQLNKWRKGGNEAREKSSKRYYYKSVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKITPEETLYDAQGMEEKGEKSTAVSVFSMPELTHNLQLLVSQCEQEIIAIDKTERECEDRQAALEHEQHQLLELVQLERNHMTTLQATLARLEQLSENPELSLSQAEQLFLELQHDYAAEYKEFGLADLAAGVIAPLLKRELNDWQPLQEPTQPVQLIKRWRGILQPDGPDVSEQESRNIFDPYSSLIWAGVMPSFRACAASWQPKEHALMAALLDAWAPLLPTWVLDSVLEQLVLPRLTIGVSEWDPLTDTVPIHSWILPWHAILGSKLEESIYPQIRSKLGVALQAWSPQDRSARAMLTPWQTAFAEEQLVQFLLRHIIPKLQAVLAEFVINPLQQNLELWHQVWEWHELIPAHHMAQLLDKHFFPRWMQVLVMWLNQSPDYAEISRWYAGWKSMFSEPILREPCIKEHLRRALDMLHRATDAVLQTTTAPPPPMPSAPAPVLLPPVMLVDVASPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDSSFTNWQPVGLNQLLERAQTGLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- iTF_00585188; iTF_00585958; iTF_00506855; iTF_00522949; iTF_00575573; iTF_00608433; iTF_00557906; iTF_00510533; iTF_00601783; iTF_00583672; iTF_00528795; iTF_00537502;
- 80% Identity
- -