Dmer012868.1
Basic Information
- Insect
- Drosophila meridiana
- Gene Symbol
- sip1
- Assembly
- GCA_035045185.1
- Location
- JAWNPF010000161.1:209047-212921[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-96 9.5e-93 310.9 14.3 4 275 427 697 424 697 0.96 2 2 0.22 1.1e+03 -0.9 0.0 158 193 710 742 703 752 0.56
Sequence Information
- Coding Sequence
- ATGTCTGACAACGAATACGAACGTTTTGAGATCACAGACTATGATTTGGACAATGAGTTTAATATAAACAGGCCACGCAGACGCCACACCAAGCATCAACAAATTTATGGCATTTGGGCCGATGACAGCGACAATGAGGGCGAAGAGGAGAGCAGCGGTCGCCGCGGCAGACGTGGCCTGGGCGGCGGCTCCTCCAGCAAGCCCAAGGATTACACCGCGCCCGTAAATTTCGTGGCCGGCGGGATTCAGCAAGCCggcaagaagcagaagaagaagcagctgcAGGAGGAGCACGCGGCCAGCGATGAGGATGGCAGTGCGGCGGATGACAGCGACGAGGCGCGACCCTCGTTTGGACGCAAACAGCCGCAGCTGATGGACGACAGCGATGCCAACAGCTCCGACAGCTCTGCGGAGCGGGAGGAGCCGGCGCCACGCCCCAAAATGACCGCGAACAGCACTGCGGGATTACGCCACAATTCGCACATAGCGGGCAATCGGAATGTCGGTGCCTGGGAGCAGCATACGCGCGGCATTGGCGCCAAACTGCTGCTCCAAATGGGCTACGAGCCCGGCAAGGGTCTGGGCAAGGATTTGCAGGGTATCTCGCAGCCGGTGCAGGCCCACGTGCGCAAAGGACGCGGTGCCATCGGCGCCTATGGCCCAGAGACGGCGGCCAGTGTGCCCGGCCAGCCCaagcagctgaagctggacGAGGATGCCAGGGACACCAAGGAATCCAAGGAGCAACTCAACAAATGGAAAAAAGGCGGCGGGGAAATCCGGGAAAAGAATGCCAAGCGCTACTACTACAAGTCCGTGGAGGAGGTCATTGCCAAGGGCAAGAAGTCGGATCACCTGCTCTCCGAGAAGCTGAGCAAGCGGCTCGGCAATGTGCCAGTGATAGACATGACCGGCCCGGAGAGGCGCGTGCTCAGCGGCTACCACGCCCTGGCCCAGAGCAAAATGACGCCCGAGGAGACGTTGTATGAGGCGCAGCCAGGTGAGGAGCACGCAGAGAAGCCCAAGCCCGTCTCCGTCTTCAGCATGCCGGAGCTGACGCACAATCTGCAGCTGCTCGTCAGCCAATGCGAGCAGGAGATCATCGCCATAGACAAGGAGGAGCGCGAGTGCTCCGATCGGCAGGCGGCGCTGCTGCACGAGCAgaagcagctgctggagctggtgcAGCTGGAGCGAAATCACATGAATACGCTGGAGGCGGCGCTGCTCCGCCTGGAGCAGCTCAGCGAGACGCCCGACCTGAGTCTAGTCCAGGCGGAGCGCCTGTTCCTGGAGCTGCAGCACGACTATGCGGCGGAGTACAAGGAGTTCGGACTGGCGGATCTGGCAGCGGGCGTCATTGCGCCGCTACTGAAGCGGGAGCTCAATGATTGGCAGCCGCTGGAGCAGCCGAcgcagccgctgcagctgaTCAAGCGTTGGCGCGGCAtactgcagcaggagcaggagccggacggactgacggatCAGCAATCCCGCAACGTCTTCGATCCCTACTCCTCACTCATCTGGGCGGGCGTCATGCCCTCGTTCCGAGCGTGCGCCGCCAGCTGGCAGCCGAAGCAGCATGCTCCAATGGCGGCGCTGCTCGATGCCTgggcgccgctgctgcccaCCTGGGTGCTGGACTCGGTGCTGGAGCAGCTGGTGCTGCCGCGCCTGACGGCGGGCGTGCGTGACTGGGATCCCCTGACTGATACTGTTCCCATTCACAGCTGGATCCTGCCCTGGCATGGCATATTGGGCGCCAAGCTGGAGGAGTCCATCTATCCGCAGATACGCAGCAaactgggcgtggcactgcAGGCCTGGTCACCGCAGGATCGTTCCGCACGCGCCATGCTCACGCCCTGGCTGTCAGCGTTCCCGGAGGAGCAACTGGTCCAGttcctgctgcgccacatcataCCCAAGCTGCAGGCGGTGCTCGCGGAATTCGTCATCAATCCGCTGCAGCAGAACCTGGAGCTGTGGCACCAGGTCTGGGAGTGGCACGAGCTCATACCCGCCCAGCACATGGCCCAGCTGCTGGACAAGCATTTCTTTCCGCGCTGGATGCAGGTGCTCGTCATCTGGCTCAATCAGGCGCCAGATTTTGCCGAGATCTCGCGCTGGTATGCCGGCTGGAAGAGCATGCTGAGTGAGTCGATTCTACGCGAACCCTGCATCAAGGAGCATCTGCGTCGTGCTTTGGACATGCTGCATCGTGCCACGGATGCCGTGCTCCAGCCCACTTcggccccgcccccgcccaTGCCGCCAGCGCCCACTCCTGTCCTGCTCACGCCCGTGATGCTCGTCGATGTGGCGCCGCCCGCTCAGCTGGAGTTCAAGGAGCTCGTCTCGCAGAAGTGTGCCGAGCTGGGCATCATCTTTGCGCCGCTGCCAGGTCGCAGAGAACTGGGCAAACAGATCTACCGCGTGGGAAAACTGTTTTGCTATATTGATCGGAATGTTTGCATGCTAAGCGATATTAGCTTTACGAATTGGCAGCCGGTGGGATTGAATCAACTACTGGAACGTGCACAGACGGGCCTCATCTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNEGEEESSGRRGRRGLGGGSSSKPKDYTAPVNFVAGGIQQAGKKQKKKQLQEEHAASDEDGSAADDSDEARPSFGRKQPQLMDDSDANSSDSSAEREEPAPRPKMTANSTAGLRHNSHIAGNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVPGQPKQLKLDEDARDTKESKEQLNKWKKGGGEIREKNAKRYYYKSVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQSKMTPEETLYEAQPGEEHAEKPKPVSVFSMPELTHNLQLLVSQCEQEIIAIDKEERECSDRQAALLHEQKQLLELVQLERNHMNTLEAALLRLEQLSETPDLSLVQAERLFLELQHDYAAEYKEFGLADLAAGVIAPLLKRELNDWQPLEQPTQPLQLIKRWRGILQQEQEPDGLTDQQSRNVFDPYSSLIWAGVMPSFRACAASWQPKQHAPMAALLDAWAPLLPTWVLDSVLEQLVLPRLTAGVRDWDPLTDTVPIHSWILPWHGILGAKLEESIYPQIRSKLGVALQAWSPQDRSARAMLTPWLSAFPEEQLVQFLLRHIIPKLQAVLAEFVINPLQQNLELWHQVWEWHELIPAQHMAQLLDKHFFPRWMQVLVIWLNQAPDFAEISRWYAGWKSMLSESILREPCIKEHLRRALDMLHRATDAVLQPTSAPPPPMPPAPTPVLLTPVMLVDVAPPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDISFTNWQPVGLNQLLERAQTGLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- iTF_00545228;
- 80% Identity
- -