Dsta002423.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila stalkeri
Gene Symbol
sip1
Assembly
GCA_035047405.1
Location
JAWNPR010000039.1:26529784-26534456[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-96 8.1e-93 311.1 15.0 4 275 426 694 423 694 0.97
2 2 0.16 1e+03 -0.8 0.0 244 269 708 733 699 749 0.55

Sequence Information

Coding Sequence
ATGTCCGACAATGAATACGAACGTTTTGAGATCACAGACTATGATTTGGATAATGAGTTTAATATAAACCGGCCACGCAGACGTCACACCAAGCATCAACAAATTTATGGCATTTGGGCCGATGACAGTGACAATGAGGACGAGGGCGAAAGCAGTGGGCGACGCGGTCGACGTGGCTTGAGCGGCGGTTCAACCAGCAAACCCAAGGATTATACGGCTCCAGTAAATTTCGTAGCCGGCGGCATTCAGCAAGCCGGCAAAAAGCAGAAGAAACAGCTGCATGAGCAGGAGCCAGCACAAAGTGATGAGAATGCCAGCGAGGCAGATGACAGTGACGAGGCGCGACCCTCATTTGGACGCAAACAGCCAGAGCTGATGGATGACAGCGATGCCAACAGCTCCGACAGCTCGGCGGCCCAAGAGGAGCTGCAGCAACGCCCGAAAATGTCCTCAAATGCCACAGCAGGACTTCGACACAAGTCGCACATAGCAAGCAATCGTAATGTGGGTGCCTGGGAGCAGCATACACGCGGCATAGGTGCCAAGCTTCTGCTTCAGATGGGCTACGAGCCCGGCAAGGGTCTGGGCAAGGATTTGCAGGGCATCTCGCAACCGGTGCAGGCTCACGTGCGCAAAGGACGCGGCGCCATCGGTGCCTATGGCCCAGAGACAGCAGCCAGTGTGCCCGGCCAGCCGAAGCAGCTGAAGATGGACGAAGATACCAAGGATTCCAAAGAGTCCAAGGAGCAGCTCAACAAATGGAAGAAGGGCGAAGTACGTGAGAAGAATGCCAAACGCTATTACTACAGGACCGTGGAGGAGGTCATTGCCAAGGGCAAGAAATCGGATCATTTGCTATCCGAGAAGCTCAGCAAACGGCTGGGCAATGTGCCAGTAATAGACATGACCGGACCGGAGCGTCGTGTGCTCAGCGGCTATCACGCCCTGGCCCAGAGCAAAATGGTGCCCGAGGAGACGCTATACGATGCTCAGGCGGGTGATGAGAATGCCGAGAAGACCGCACCCGCGGCCTCCGTCTTCAGCATGCCGGAGCTGACGCACAATCTCCAGCTGCTCGTGAGTCAATGCGAGCAGGATATCATTGCGATTGATAAGGAGGAGCGGGAATGTGCCGATAGGCAGGCAGCGTTGCTGCACGAACAGAAGCAGCTGCTGGAGCTGGTGCAGCTGGAGCGGAATCATATGAATACGCTGGAAGCGGCACTGCAGCGGCTCGAACAGCTCAGCGAGACGCCCGATCTGAGTCTCGTCCAGGCGGAACGTCTATTCCTCGAGCTGCAGCATGACTATGCGGCCGAGTACAAAGAGTTCGGATTGGCCGATCTGGCAGCGGGCGTCATTGCGCCGCTGCTGAAGCGTGAGCTGAACGATTGGCAACCCCTGGAGCAGCCGACACAGCCGTTGCCATTGATCAAACGCTGGCGCGGCATACTGCAGCAGGATGAGCTTGAGCTGACAGAGCAGCAAACACGCAACATCTTCGATCCCTACTCCTCGCTCATCTGGGCTGGAGTGATGCCATCGTTTAGAGCGTGCGCCGCCAGCTGGCAACCAAAGCAGCATGCTCCAATGGCAGCGCTGCTTGATGCTTGGGCACCGTTGTTGCCCACCTGGGTGCTGGACTCGGTGCTGGAGCAGTTGGTGTTGCCACGTCTGATGGCGGGCGTCAAGGATTGGGATCCCCTCACCGATACGGTGCCCATTCACAGCTGGATTCTGCCCTGGCATGGCATATTGGGTGCCAAGCTGGAGGAGTCCATCTATCCGCAGATACGTAGCAaactgggcgtggcactgcAGGCATGGTCGCCTCAAGATCGTTCAGCACGCGCCATGCTCACGCCCTGGCAATCGGCATTTCCCGAGGAGCAACTGGTGCAATTCCTGCTGCGTCACATCATACCCAAGCTGCAGGCGGTGCTGGGGGAATTCGTCATCAATCCGTTGCAGCAGAACCTGGAGTTGTGGCATCAGGTGTGGGAGTGGCACGAGCTCATACCCGCCCAGCACATGGCCCAGCTGCTCGATAAGCACTTCTTCCCGCGCTGGATGCAAGTCCTAGTCATTTGGCTCAATCAGGCGCCCGACTTTGCAGAGATCTCGCGCTGGTATACCGGCTGGAAGAGCATGCTAAGCGAATCGATATTGCGCGAGCCCTGCATCAAGGAGCATCTGCGTCGCGCCTTGGAAATGCTGCATCGTGCCACAGACGCTGTACTCCAGCCCACAGCTGCCCCGCCGCCGCCCATGCCCCCTGGCCCAACGCCTGTCCTGCTGACGCCCGTGATGCTCGTCGATGTGGCGCCACCCGCTCAGCTGGAATTCAAGGAGCTCGTCTCGCAGAAGTGCGCCGAGCTGGGCATCATCTTTGCCCCACTACCTGGCCGAAGGGAACTGGGCAAACAGaTCTACCGCGTGGGCAAACTCTTTTGCTATATTGATCGAAATGTTTGCATGTTAAGCGATATTAGTTTTACGAATTGGCAGCCCGTCGGATTGAATCAACTGCTGGAACGCGCGCAGACGGGCATTATCTAG
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNEDEGESSGRRGRRGLSGGSTSKPKDYTAPVNFVAGGIQQAGKKQKKQLHEQEPAQSDENASEADDSDEARPSFGRKQPELMDDSDANSSDSSAAQEELQQRPKMSSNATAGLRHKSHIASNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVPGQPKQLKMDEDTKDSKESKEQLNKWKKGEVREKNAKRYYYRTVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQSKMVPEETLYDAQAGDENAEKTAPAASVFSMPELTHNLQLLVSQCEQDIIAIDKEERECADRQAALLHEQKQLLELVQLERNHMNTLEAALQRLEQLSETPDLSLVQAERLFLELQHDYAAEYKEFGLADLAAGVIAPLLKRELNDWQPLEQPTQPLPLIKRWRGILQQDELELTEQQTRNIFDPYSSLIWAGVMPSFRACAASWQPKQHAPMAALLDAWAPLLPTWVLDSVLEQLVLPRLMAGVKDWDPLTDTVPIHSWILPWHGILGAKLEESIYPQIRSKLGVALQAWSPQDRSARAMLTPWQSAFPEEQLVQFLLRHIIPKLQAVLGEFVINPLQQNLELWHQVWEWHELIPAQHMAQLLDKHFFPRWMQVLVIWLNQAPDFAEISRWYTGWKSMLSESILREPCIKEHLRRALEMLHRATDAVLQPTAAPPPPMPPGPTPVLLTPVMLVDVAPPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDISFTNWQPVGLNQLLERAQTGII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476613;
90% Identity
iTF_00545228;
80% Identity
-