Zvit001716.1
Basic Information
- Insect
- Zaprionus vittiger
- Gene Symbol
- sip1
- Assembly
- GCA_018904025.1
- Location
- JAEIFQ010001099.1:9948650-9951346[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-96 3.5e-92 308.8 13.6 1 275 426 697 426 697 0.97 2 2 0.2 1.6e+03 -1.7 0.0 158 202 710 751 703 752 0.62
Sequence Information
- Coding Sequence
- ATGTCGGACAATGAGTACGAACGTTTTGAAATCACAGACTATGATCTGGACAACGAATTCAATATAAACAGACCACGGCGGCGTCACACCAAGCACCAGCAAATTTACGGCATTTGGGCAGATGACAGCGACAATGAGAGCGAGGGCGAAGGTAGCAGTCGACGTGGACGCCGTGGCTTGGGCGGTGGCTCATCTGGCAAGTCAAAGGATTACACTGCGCCAGTGAGCTTCGTAGCCGGTGGCATTCAGCAGGCCGGCAAAAAGAAAAAGAAGCCACAGAACGACGCCGGCAGCGATGCCGAAGGCAGCGACGCAGACGCGGACAGTGATGAGGTGCGTCCATCGTTCGGGCGCAAGCAACCGCAGCTGATGGACAACAGCGATGCCAACAACAGTTCGGACAGCTCAGCGGAAGCAGCAGAGGAGCAGGCACCGCGCAAAGGAATCTCGGCGCGTAACACGGCCGGACTGAGGCACAACTCACATATTGTTAGCAATCGGAATGTGGGTGCCTGGGAGCAACATACGCGCGGCATAGGTGCCAAGCTGCTACTACAAATGGGTTACGAGCCCGGCAAGGGTCTTGGCAAGGATCTGCAAGGTATATCGCAGCCAGTGCAGGCCCATGTGCGCAAAGGACGTGGTGCCATTGGTGCTTATGGCCCCGAGACTGCAGCCAGTGTGGGCGGTCAGGTGAAGGCACTGAAAATCGACGAGGACGTCAAGGAGGCAAAAGAGTTCAAGGAGCAACTCAACAAATGGAAGAAAGGAGGCACGGAGCCAACGCGTGAGAAGTCCTCGAAACGTTACTACTACAAATCCGTGGAGGAGGTTATTGCCAAGGGCAAGAAGTCGGATCATCTGCTGTCCGAGAAGCTGAGCAAGCGTCTTGGCAATGTGCCCGTCATAGACATGACGGGACCAGAGCGACGCGTGCTCAGCGGCTATCATGCGCTTGCCCAAAACAAAATTATGCCCGAGGAGTCGCTCTATGATGCACAGGGCGCAGGTGAGGAGACTGGGGAGAAGGCACCACCAGCCAGTGTGTTCAGCATGCCCGAGCTGACGCACAACCTGCAGCTGCTGGTGAGCCAGTGCGAGCAGGAGATAATTGCCATAGACAAGGCAGAGAGGGAGTGTTCGGATCGGCAATCGGCGCTGGAGCACGAACACCAGCAGTTGCAAGAGCTGGTACACCTCGAGCGGAATCATATGACCACACTGCAGGGTGCTCTGGCTCGGCTCGAAGAGCTGAGCGAAAACCCCGAACTGAGTCTATCGCAAGCAGAGAAACTGTTCCTGGAGCTGCAACATGACTTTGCTGCGGAGTACAAAGAGTTCGGACTGGCTGATCTGGCAGCGGGCGTGATAGCGCCGCTGGTGAAGCGTGAACTGAGCGACTGGCAACCGCTGGAGCAGCCCACCAAGCCGTTGCAGCTGATCAAGCGTTGGCGTGGCATACTCCAGTCTGAGCTGGACGCCGACGAGGGTCAAGAGCCGCGCAATGTCTTCGATCCCTACTCGTCGCTCATCTGGGCTGGTGTGATGCCCTCGTTCCGTGCCTGTGCTGCCAGTTGGCAGCCCAAGCAACACGCTCTAATGGCAGCCCTGCTCGATGCTTGGGCACCGCTGTTGCCCACTTGGGTGCTGGACTCGGTGCTGGAGCAGCTTGTCTTGCCACGCCTTACAGTCGGTGTTTGCGAATGGGATCCCCTCACAGACACAGTGCCCATACACAGCTGGATATTGCCCTGGCATGGCATCTTGGGTGCCAAGCTGGAGGAGACCATCTATCCTCAGATACGCAGCAAACTGGGCGTGGCACTGCAGGCCTGGTCGCCACAGGATCGTTCGGCACGTGCCATGCTGACGCCCTGGAAGAGCGCCTTTGATGAGGAGCAACTTGTGCAGTTCCTGCTGCGTCACATCATACCCAAGCTGCAGGCAGTGCTGGCCGAGTTCGTCATCAATCCGCTGCAACAGAATCTGGAGCTATGGCATCAGGTGTGGGAATGGAACGAGCTAATACCCGCCCAGCACATGGCTCAGCTGTTGGACAAGCACTTCTTTCCCCGCTGGATGCAAGTGCTTGTCATGTGGCTCAATCAGTCGCCAGACTATGCGGAGATCTCGCGCTGGTATGGCGGCTGGAAGAGCATGTTCAGTGAGGCCATTTTGCGTGAACCCAGCATCAAGGAGCATCTGCGTCGCGCCCTTGACATGCTGCATCGTGCCACAGATGCTGTGCTCCAACCCACAGCAGCTCCGCCTCCACCCATGCCGCCTGCACCGACTCCTGTGCTGCTGGCGCCCGTCATGCTGGTCGATGTGGTGCAGCCCGCTCAGTTGGAGTTCAAGGAGCTTGTCTCACAGAAATGCGCCGAACTGGGCATCATATTTGCCCCACTGCCAGGCAGACGAGAGTTGGGCAAACAGATCTATCGCGTGGGCAAACTCTTCTGCTTTATCGATCGCAATGTCTGCATGCTCAGCGACAGCAGCTTGACAAACTGGCAGCCTGTTGCTCTTAATCAGCTCTTGGAACGCGCACAGACTGGCCTGCTCTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNESEGEGSSRRGRRGLGGGSSGKSKDYTAPVSFVAGGIQQAGKKKKKPQNDAGSDAEGSDADADSDEVRPSFGRKQPQLMDNSDANNSSDSSAEAAEEQAPRKGISARNTAGLRHNSHIVSNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVGGQVKALKIDEDVKEAKEFKEQLNKWKKGGTEPTREKSSKRYYYKSVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKIMPEESLYDAQGAGEETGEKAPPASVFSMPELTHNLQLLVSQCEQEIIAIDKAERECSDRQSALEHEHQQLQELVHLERNHMTTLQGALARLEELSENPELSLSQAEKLFLELQHDFAAEYKEFGLADLAAGVIAPLVKRELSDWQPLEQPTKPLQLIKRWRGILQSELDADEGQEPRNVFDPYSSLIWAGVMPSFRACAASWQPKQHALMAALLDAWAPLLPTWVLDSVLEQLVLPRLTVGVCEWDPLTDTVPIHSWILPWHGILGAKLEETIYPQIRSKLGVALQAWSPQDRSARAMLTPWKSAFDEEQLVQFLLRHIIPKLQAVLAEFVINPLQQNLELWHQVWEWNELIPAQHMAQLLDKHFFPRWMQVLVMWLNQSPDYAEISRWYGGWKSMFSEAILREPSIKEHLRRALDMLHRATDAVLQPTAAPPPPMPPAPTPVLLAPVMLVDVVQPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCFIDRNVCMLSDSSLTNWQPVALNQLLERAQTGLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- iTF_01554688;
- 80% Identity
- -