Dpha018005.1
Basic Information
- Insect
- Drosophila phalerata
- Gene Symbol
- sip1
- Assembly
- GCA_951394115.2
- Location
- OX596008.2:16358269-16360949[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.34 4.5e+03 -2.5 0.1 44 86 234 275 232 285 0.77 2 3 4.7e-98 6.2e-94 315.2 15.1 2 275 426 696 425 696 0.97 3 3 0.37 4.9e+03 -2.6 0.0 245 269 711 735 702 748 0.65
Sequence Information
- Coding Sequence
- ATGTCGGACAATGAATATGAACGCTTCGAAATCACGGACTACGATCTGGACAATGAGTTTAACATAAACAGACCGCGCAGACGTCAAACCAAGCATCAGCAAATTTATGGCATCTGGGCGGATGACAGCGACAATGAGAGTGAAGGCGAGAAGAGCAGCGGACGACGAGGACGTCGTGGATTGGGCGGTGGCTCTGCTGGTAAATCGAAGGATTACACAGCGCCCGTGAATTTCGTTGCCGGCGGAATTCAGCAATCCGGCaaaaagcagaagaagaagcaggagGAACACGCGGGCAGCGATGAGGAAGGGGGCAGCAATGCGGACGACAGCGATGAATCGCGTCCTTCATTTGGACGCAAGCAGCCGCAGCTGATGGACAATAGCGATGGCAATAGCTCCGACAGCTCGGCGGGAGCGGAGGAGCAGCAGCCGCGAAAGGCAACGATGACAGCTCGTCAGACAGCCGGACTCAGACATAACTCCCACATTGCGAGTAATAGGAATGTGGGTGCCTGGGAACAGCATACACGCGGCATTGGCGCCAAGCTGCTTCTGCAAATGGGTTACGAGCCTGGCAAGGGCTTGGGTAAGGATCTGCAGGGTATCTCGCAGCCGGTGCAGGCGCATGTGCGAAAAGGACGCGGTGCCATTGGCGCCTATGGACCAGAGACAGCAGCTAGCGTGGGCGGTCAGCCAAAGCCCCTGAAAGGCGACGAGGGAGTACAGGAGACCAAAGAGTCCAAGGATCAGCTCAACAAATGGAAGAAAGGCGGCAACGAGGCACGTGAAAAGTCCACCAAGCGATACTACTACAAATCCGTGGAGGAAGTCATTGCCAAGGGAAAAAAATCGGATCATCTGCTGTCTGAAAAGCTGAGCAAGCGACTTGGCAATGTTCCAGTGATTGATATGACTGGACCAGAGCGACGGGTGCTCAGCGGATATCATGCCTTGGCCCAGAACAAGATAACGCCCGAGGAGACGCTCTACGACGCGCAGGGAATAGAGGATAAGGGGGAGAAGATTACGCCCGTCTCCATATTCAGCATGCCGGAACTAACCCACAATCTGCAGCTGCTGGTGAGCCAATGCGAGCAGGAGATAATTGCCATAGACAAGACAGAGCGTGAGTGTGAGGATCGTCAGGCGGCGTTGGAGcatgagcagcagcagctgctggaaCTGGTGCAATTGGAACGGAATCACATGACCACGCTCCAAGCGACACTCGCCCGCCTTGATCAGCTCAGCGAGAATCCGGAGTTGAGTCTGGGCCAGGCGGAACACTTGTTCCTTGAGCTGCAGCAAGACTATGCAACGGAGTACAAGGAATTCGGATTGGCCGACCTGGCAGCCGGGGTTATAGCGCCGCTCCTGAAGCGGGAACTCAGCGATTGGCAACCGCTGCAGCAGCCCACGCATCCACTGCAGCTTATCAAGCGATGGCGGAGCATATTGCAGCAGGATGGACCAGATGTGTCGGAGCAACAGTCTCGCAATATCTTTGATCCCTACTCCTCGCTCATCTGGGCTGGTGTGATGCCCTCGTTTAGAGCCTGTGCCAGCAGCTGGCAACCAAAGGAGCATGCCCCAATGGCAGCTCTGCTGGATGCTTGGGCGCCTCTGTTGCCCACCTGGGTGCTTGACTCGGTGCTGGAGCAGCTTGTGCTGCCGCGACTGACGATTGGCGTCAGCGACTGGGATCCTCTGACCGATACTGTGCCCATACATAGCTGGATTCTGCCATGGCATGCCATACTGGGGGCCAAGCTGGAGGAGTCCATCTATCCGCAGATCCGTAGCAAACTGGGCGTTGCACTGCAGGCGTGGTCACCGCAGGATCGATCTGCACGCGCCATGCTGACGCCCTGGCAAACGGCCTTTGCCGAGGAGCAACTGGTGCAGTTCCTGCTCCGTCATATTATACCCAAGCTGCAGGCGGTGCTCGCCGAATTTGTGATCAATCCGCTGCAACAGAATCTGGAGCTGTGGCATCAGGTGTGGGAGTGGCATGAGCTCATACCCGCCCATCACATGGCCCAGCTGCTGGACAAGCATTTCTTTCCGCGCTGGATGCAGGTGCTCGTTATGTGGTTGAATCAGTCGCCGGATTATGCTGAAATCTCCCGCTGGTATGCCGGCTGGAAGAGCATGTTCAGTGAGGCGATCCTACGGGAGCCTTGCATCAAGGAGCACTTGCGTCGCGCTCTCGATATGCTGCACCGTGCCACCGATGCGGTGCTACAAACCACCTCTGCACCGCCACCACCCATGCCACCAACACCCGCGCCTGTGCTCCTCACTCCTGTCATTCTCGTCGATGTGGCACCACCTGCTCAGCTGGAATTCAAGGAGCTCGTCTCACAGAAATGCGCCGAGTTGGGCATCATATTTGCCCCACTGCCAGGTCGACGGGAACTGGGCAAACAGATCTATCGCGTGGGCAAGCTCTTCTGCTACATCGATCGCAATGTGTGCATGTTGAGCGACAGCAGCTTTGCGAATTGGCAACCCGTGGGTCTTAATCAATTGTTGGAGCGGTCACAAACCGGACtcctttaa
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRQTKHQQIYGIWADDSDNESEGEKSSGRRGRRGLGGGSAGKSKDYTAPVNFVAGGIQQSGKKQKKKQEEHAGSDEEGGSNADDSDESRPSFGRKQPQLMDNSDGNSSDSSAGAEEQQPRKATMTARQTAGLRHNSHIASNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVGGQPKPLKGDEGVQETKESKDQLNKWKKGGNEAREKSTKRYYYKSVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKITPEETLYDAQGIEDKGEKITPVSIFSMPELTHNLQLLVSQCEQEIIAIDKTERECEDRQAALEHEQQQLLELVQLERNHMTTLQATLARLDQLSENPELSLGQAEHLFLELQQDYATEYKEFGLADLAAGVIAPLLKRELSDWQPLQQPTHPLQLIKRWRSILQQDGPDVSEQQSRNIFDPYSSLIWAGVMPSFRACASSWQPKEHAPMAALLDAWAPLLPTWVLDSVLEQLVLPRLTIGVSDWDPLTDTVPIHSWILPWHAILGAKLEESIYPQIRSKLGVALQAWSPQDRSARAMLTPWQTAFAEEQLVQFLLRHIIPKLQAVLAEFVINPLQQNLELWHQVWEWHELIPAHHMAQLLDKHFFPRWMQVLVMWLNQSPDYAEISRWYAGWKSMFSEAILREPCIKEHLRRALDMLHRATDAVLQTTSAPPPPMPPTPAPVLLTPVILVDVAPPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDSSFANWQPVGLNQLLERSQTGLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- iTF_00533792;
- 80% Identity
- -