Zkol005509.1
Basic Information
- Insect
- Zaprionus kolodkinae
- Gene Symbol
- sip1
- Assembly
- GCA_018901885.1
- Location
- JAEIFM010000247.1:6937464-6940168[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-96 2.5e-92 309.2 15.0 4 275 431 699 428 699 0.96 2 2 0.25 2e+03 -2.1 0.0 245 269 714 738 705 754 0.49
Sequence Information
- Coding Sequence
- ATGTCGGACAATGAATACGAACGCTTTGAGATCACAGATTATGATCTGGACAATGAATTCAATATAAACAGACCGCGAAGACGTCACACCAAGCACCAGCAAATTTACGGCATTTGGGCCGATGACAGCGACAATGAGAGCGAAGGCGAGAGCAGCAATCGACGTGGACGACGTGGCTTGGGTGGTGGCACGTCGGGCAAGTCCAAAGATTACACCGCACCGGTGAGCTTCGTAGCCGGCGGCATTCAGCAGGCCGGCAAAAAGCAAAAGAAACCACAGGATGACGCCGCCAGCGAGGCGGAGGGCAGTGAGGCGGACGACAGTGATGAGGCACGTCCTTCATTTGGCCGCAAGCAACCACAATTGCTGGACAACAGCGACGCCAACAACGTCAGCTCGGACAGTTCAGCCGAAGCAGCCGAGGCCGAGCAGCCGCGCCAGGGAATCTCGGCACGCAACACGGCGGGCCTGAGGCACAACTCGCATATTGCCAGCAATCGAAATGTTGGTGCCTGGGAGCAGCATACACGCGGCATAGGTGCCAAGCTGCTGCTGCAGATGGGCTACGAACCGGGCAAGGGTCTGGGCAAGGATCTGCAGGGTATCTCGCAGCCGGTGCAGGCGCATGTGCGCAAGGGACGCGGTGCCATCGGTGCCTATGGCCCCGAAACGGCAGCCAGTGTGGGTGGCCAGGTGAAGGCATTGAAAATCGATGAAGATGTCAAGGAGGCCAAAGAGTTCAAGGAGCAACTGAACAAATGGAAAAAAGGAGGAGCAGGCAACGAGACGCGCGAAAAGAGCTCCAAGCGTTACTATTACAAATCCGTGGAGGAGGTCATAGCCAAGGGCAAGAAGTCGGATCATCTGCTGTCCGAGAAGCTAAGCAAACGCCTCGGGAATGTGCCCGTTATAGACATGACCGGTCCAGAGCGACGTGTGCTCAGCGGTTACCATGCCCTCGCCCAGAACAAGATTGTGCCCGATGAGACGCTCTACGATGCGCAGGGTATAGCGGAGGAGACGGGTGGAGACAAGGCGCCACCAGTGAGTGTCTTCAGCATGCCGGAACTAACGCACAATCTGCAGCTGCTGGTGAGCCAGTGCGAGCAGGAGATCATTTCCATAGACAAGGCGGAGCGGGAATGCTCGGATAGACAGGCCGCATTGGAGCACGAACACCAGCAGCTGCAGGAACTGGTGCAGCTGGAACGGAATCACATGACCACATTGCAGGGAGCTCTGGCACGTCTGGAGGAACTAAGCGAGAATCCCGATCTGAGTCTGTTGCAAGCGGAGAAATTGTTCCTGGAGCTGCAACATGACTTTGCGGCGGAATACAAAGAGTTCGGACTGGCCGATCTGGCAGCGGGTGTGATAGCGCCGCTTGTGAAGCGTGAACTGGCCGACTGGCAGCCGCTGGAGCAGCCCACGAAACCGTTGCAGTTGATCAAACGTTGGCGTGCAATCCTGCAGTCCGACCACGAACCCAACGATGGCCAACAATCGCGCAATGTCTTTGATCCGTACTCATCCCTCATCTGGGCCGGAGTGATGCCCTCGTTCCGTGCCTGCGCCGCCAGTTGGCAGCCCAAGCAGCATGCTCTAATGGCCGCACTGCTCGACGCTTGGGCGCCACTGTTGCCCACCTGGGTGCTCGACTCTGTGCTGGAGCAGCTTGTGCTGCCACGTCTCACGGTGGGTGTCTGTGAATGGGATCCTCTCACGGATACGGTGCCCATTCACAGCTGGATATTACCCTGGCATGGTATATTGGGTGCCAAGCTGGAGGAGACCATCTATCCGCAGATACGCAGTAAACTGGGCGTGGCACTGCAGGCCTGGTCACCGCAAGATCGTTCGGCACGCGCCATGCTGACGCCCTGGAAGTCGGCATTCGATGAGGAGCAGTTGGTGCAGTTTCTCCTACGTCACATCATACCCAAGCTGCAGGCTGTGCTGGCCGAGTTCGTCATTAATCCATTGCAACAAAATCTGGAGCTATGGCATCAGGTGTGGGAATGGAATGAGCTAATCCCAGCGCAGCACATGGCACAACTGCTGGACAAACATTTCTTTCCACGCTGGATGCAGGTGCTGGTCATGTGGCTCAATCAGTCGCCCGACTATGCCGAGATCTCACGCTGGTATGCCGGCTGGAAGAGTATGTTCAGTGAGGCCATATTGCGTGAGCCATGCATCAAGGAGCATCTGCGTCGTGCGCTTGACATGTTGCATCGTGCCACAGATGCTGTGCTGCAACCGACAGCAGCTCCGCCGCCGCCCATGCCCCCAGCACCCACACCCGTGCTGCTGGCGCCCGTCATGCTGGTGGATGTGGTGCAGCCGGCTCAGCTGGAGTTCAAGGAGCTTGTCTCACAGAAATGCGCCGAATTGGGCATCATTTTTGCCCCACTGCCGGGACGACGTGAACTGGGCAAACAGATCTACCGCGTGGGCAAACTCTTCTGCTTCATCGATCGCAATGTCTGCATGCTCAGCGACAGCAGCCTGACCAATTGGCAACCTGTGGCACTGACCCAGCTACTGGAACGCGCACAGACGGGCCTAATCTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNESEGESSNRRGRRGLGGGTSGKSKDYTAPVSFVAGGIQQAGKKQKKPQDDAASEAEGSEADDSDEARPSFGRKQPQLLDNSDANNVSSDSSAEAAEAEQPRQGISARNTAGLRHNSHIASNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVGGQVKALKIDEDVKEAKEFKEQLNKWKKGGAGNETREKSSKRYYYKSVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKIVPDETLYDAQGIAEETGGDKAPPVSVFSMPELTHNLQLLVSQCEQEIISIDKAERECSDRQAALEHEHQQLQELVQLERNHMTTLQGALARLEELSENPDLSLLQAEKLFLELQHDFAAEYKEFGLADLAAGVIAPLVKRELADWQPLEQPTKPLQLIKRWRAILQSDHEPNDGQQSRNVFDPYSSLIWAGVMPSFRACAASWQPKQHALMAALLDAWAPLLPTWVLDSVLEQLVLPRLTVGVCEWDPLTDTVPIHSWILPWHGILGAKLEETIYPQIRSKLGVALQAWSPQDRSARAMLTPWKSAFDEEQLVQFLLRHIIPKLQAVLAEFVINPLQQNLELWHQVWEWNELIPAQHMAQLLDKHFFPRWMQVLVMWLNQSPDYAEISRWYAGWKSMFSEAILREPCIKEHLRRALDMLHRATDAVLQPTAAPPPPMPPAPTPVLLAPVMLVDVVQPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCFIDRNVCMLSDSSLTNWQPVALTQLLERAQTGLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- iTF_01553955; iTF_01548845; iTF_01552446; iTF_01553221; iTF_01551720; iTF_01555402; iTF_01559749; iTF_01550987; iTF_01557551; iTF_01550268; iTF_01559024; iTF_01556823; iTF_01558285;
- 80% Identity
- -