Dnav001035.1
Basic Information
- Insect
- Drosophila navojoa
- Gene Symbol
- sip1_1
- Assembly
- GCA_001654015.2
- Location
- NW:5794-9250[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-98 3.5e-94 314.9 15.7 1 275 422 694 422 694 0.98 2 2 0.13 7.7e+02 -1.1 0.0 158 190 707 738 699 749 0.51
Sequence Information
- Coding Sequence
- atgtccGACAATGAATACGAACGTTTTGAGATTACAGATTATGATCTGGACAATgagtttaatataaataggCCGCGCAGACGCCACACCAAGCATCAACAAATTTATGGCATTTGGGCTGATGACAGTGACAATGAGGGTGAAGACGAGAGCAGCGGTCGACGTGGTAGACGTGGTCTGGGCGGCGGTTCATCCAGTAAGCCCAAGGACTATACAGCTCCTGTGAATTTCGTTGCCGGCGGCATTCAGCAGGCCGgtaaaaagcaaaatgcgAAGCAGAAACAAGAGGAGCACGCAGAGAGTGATGAGAATGGCAGTGAGGCGGATGACAGCGACGAGGCGCGACCCTCGTTTGGACGAAGGCAGCCACAGCTGATGGGAGACAGCGATGCCAACAGCTCGGACAGCTCTGCGGCGGAGGAGGCGGCTCAACGTCCAAAAATGGCCGCAAACAGCACTGCTGGATTGCGACACAAGTCTCACATTGCTAGCAATCGTAATGTAGGCGCCTGGGAGCAGCACACACGTGGCATTGGCGCCAAGCTCCTGCTCCAGATGGGCTACGAGCCCGGCAAGGGTCTGGGCAAGGATTTGCAGGGCATCTCGCAGCCAGTGCAGGCGCATGTGCGCAAAGGACGCGGTGCCATCGGTGCCTATGGCCCAGAGACGGCAGCCAGCGTGCCCGGCCAGCCCAAGCAGCTGAAAACGGACGAGGATTCACAGAAGGATGCCAAAGAGAATAAGGAGCAGCTCAACAAATGGAAAAAGGGCGAGGTACGTGAAAAGAACAGCAAACGCTACTACTACAAGACCGTGGAGGAGGTGATTGCCAAGGGCAAGAAATCGGATCATTTGCTGTCCGAGAAGTTAAGCAAGCGACTGGGCAATGTGCCGGTCATAGACATGACTGGCCCGGAGCGTCGCGTGCTCAGCGGCTACCATGCCTTGGCCCAGAACAAAATCACGCCCGAGGAGACGCTGTACGACGCCCAGGCGGGCGATGAGAATGCCGAGAAGGCCGCGCCAGTAACCGTGTTCAGCATGCCGGAGCTGACGCACAATCTGCAGCTGCTCGTGAGCCAATGCGAGCAGGAAATCATTGCGATAGACAAGGAGGAGCGCGAATGCTCCGATAGACAGGCAGCGCTGCAGCACGAACAGAaacagctgctggagctggtgcagcTGGAGCGCAATCATATGAACACGCTGGAGGCAGCGCTGCTCCGGGTCGAGCAGCTGAGCGAGACGCCCGACCTGAGTCTCGATCAAGCGGAGCGTCTGTTCCTGGAGCTGCAGCACGACTTTGCGGCCGAGTACAAGGAGTTCGGGCTGGCCGATCTGGCGGCGGGCGTCATTGCGCCGCTGGTGAAGCGCGAGCTGAACGATTGGCAGCCACTGGAGCAGCCCacgcagccgctgcagctgatcAAGCGCTGGCGCGGCATATTGCAGCAGCATGAGGAGCCCGAGCTGACGGATCAGCAGTCGCGCAACGTCTTCGATCCCTACTCCTCGCTCATCTGGGCCGGGGTGATGCCCTCGTTTCGCGAGTGCGCCGCCAACtggcagccgaagcagcacGCGCCGATGGCAGCGCTGCTCGATGCTTGGGCCCCGCTGCTGCCCACCTGGGTGCTGGACTCGGTGCTGGAGCAGTTGGTGCTGCCGCGGCTGACGGCGGGCGTGAGCGATTGGGATCCGTTGACCGACACGGTGCCCATTCACAGCTGGATTCTGCCCTGGCACGGCATACTGGGCGCCAAGCTGGAGGAGTCCATCTATCCGCAGATACGCAACaaactgggcgtggcactgcaGGCCTGGTCGCCGCAGGATCGTTCAGCGCGTGCCATGCTCACGCCCTGGCAGTCGGCGTTCCCGGAGGAGCAACTGGTGCAGTTCCTGCTGCGCCACATCATACCCAAGCTGCAGGCGGTGCTGGCGGAATTCGTCATCAATCCGCTGCAGCAGAACTTGGAGCTGTGGCATCAGGTGTGGGAGTGGCACGAGCTCATACCCGCCCAGCATATGGCCCAGCTGCTGGACAAACACTTCTTCCCGCGCTGGATGCAAGTCCTGGTCATTTGGCTCAATCAGGCGCCAGACTTTACGGAGATTTCCCGCTGGTATGCCGGCTGGAAGGGCATGCTGAGCGAATCGATTCTGCGCGAGCCCTGCATCAAGGAGCATCTGCGTCGCGCCCTGGACATGCTGCACCGTGCCACCGATGCCGTGCTCCAGCCCACAACTGCCCCGCCTCCGCCCATGCcgccagccccagccccagtccTGCTGACACCCGTGATGCTCGTCGATATGGCGGCGCCCGCTCAGCTCGAGTTCAAGGAGCTCGTCTCGCAGAAGTGCGCCGAGCTGGGCATCATCTTTGCCCCACTGCCCGGCCGACGGGAACTGGGCAAGCAGATCTACCGCGTGGGCAAACTCTTTTGCTATATTGATCGGAATGTTTGCATGCTGAGCGATATCAGCTTTACGAACTGGCAGCCGGTGGGACTGAATCACCTACTGGAACGAGCGCAGACGGGCATCATCTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNEGEDESSGRRGRRGLGGGSSSKPKDYTAPVNFVAGGIQQAGKKQNAKQKQEEHAESDENGSEADDSDEARPSFGRRQPQLMGDSDANSSDSSAAEEAAQRPKMAANSTAGLRHKSHIASNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVPGQPKQLKTDEDSQKDAKENKEQLNKWKKGEVREKNSKRYYYKTVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKITPEETLYDAQAGDENAEKAAPVTVFSMPELTHNLQLLVSQCEQEIIAIDKEERECSDRQAALQHEQKQLLELVQLERNHMNTLEAALLRVEQLSETPDLSLDQAERLFLELQHDFAAEYKEFGLADLAAGVIAPLVKRELNDWQPLEQPTQPLQLIKRWRGILQQHEEPELTDQQSRNVFDPYSSLIWAGVMPSFRECAANWQPKQHAPMAALLDAWAPLLPTWVLDSVLEQLVLPRLTAGVSDWDPLTDTVPIHSWILPWHGILGAKLEESIYPQIRNKLGVALQAWSPQDRSARAMLTPWQSAFPEEQLVQFLLRHIIPKLQAVLAEFVINPLQQNLELWHQVWEWHELIPAQHMAQLLDKHFFPRWMQVLVIWLNQAPDFTEISRWYAGWKGMLSESILREPCIKEHLRRALDMLHRATDAVLQPTTAPPPPMPPAPAPVLLTPVMLVDMAAPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDISFTNWQPVGLNHLLERAQTGII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- iTF_00545228;
- 80% Identity
- -