Dsor012933.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila sordidula
Gene Symbol
sip1
Assembly
GCA_035047465.1
Location
JAWNPQ010000260.1:2547098-2550572[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3e-97 2.5e-93 312.6 14.8 3 275 419 688 417 688 0.98
2 2 0.1 8.9e+02 -0.8 0.0 158 269 701 727 693 743 0.53

Sequence Information

Coding Sequence
ATGTCGGACAATGAATACGAACGTTTTGAAATCACGGACTATGATTTGGACAACGAGTTCAACATAAACAGGCCACGCAGACGCCACACCAAGCACCAGCAAATTTACGGCATTTGGGCGGATGACAGCGACAACGAGAGCGAGGGCGAAACTGTCGGTCGCCGTGGGAGGCGTGGCCTgggcggcgccgctgccggcaAGCCCAAGGATTACACGGCGCCGGTGAATTTCGTGGCCGGCGGCATTCAGCAAGCCggcaagaagcagaagaagaagagtcAGCAGGAGGAGAGCGCCGGCAGCGATGAGGAGGCCAGCGAGGCGGAGGACAGCGACGAGGCGCGTCCCTCGTTCGGACGCAAGCAGCCCCAGCTGATGGACAACAGCGATGCGAACAGCTCGGACAGCTCCGTGGGGCCGgaggagcagccgcagcgggcGACAATGTCGTCGAGGAGCACGGCGGGACTGAGGCACAACTCGCACATAGCGAGCACACGCAATGTGGGCGCCTGGGAGCAGCATACGCGCGGCATTGGcgccaagctgctgctgcaaatgggCTACGAGCCCGGCAAGGGCCTGGGCAAGGATCTGCAGGGCATCTCGCAGCCGGTGCAGGCGCATGTGCGCAAGGGACGCGGAGCCATCGGCGCCTACGGACCCGAGACGGCGGCCAGCGTGGGCGGGCAGGCCAAGCCGCTCAAGCTGGACGAGGACGTCAAGGAGGCCAAGGAGTTCAAGGAGCAGCTCAACAAGTGGAAGAAGGGCGGCAACGATGCGCGCGACAAGTCCGGCAAGCGCTACTACTACAAATCCGTCGAGGAGGTGATTGCCAAGGGCAAGAAATCCGACCATCTGCTGTCCGAGAAGCTGAGCAAGCGTCTGGGCAATGTTCCGGTCATCGACATGACCGGTCCGGAGCGACGCGTGCTCAGCGGCTACCATGCGCTGGCCCAAACCAAAATCACGCCCGAGGAGACGCTCTACGACGAGGAGAAGGGCACGCCCGCCTCCGTCTTCAGCATGCCCGAGCTGACGCACAATCTCCAGCTGCTGGTGAGCCAGTGCGAGCAGGAGATCATCGCCATTGACAAGTCGGAGCGTGAGTGCGCCGATCGCCAGGCGGGACTGGAGCACGAGCAGGaccagctgctggagctggtgcAGCTGGAGCGCAATCATATGAGCACGCTGGAGGCGGCGCTGACCCGGCTCGAGACCCTCAGCGAGAGTCCCGAGCTGACCGTGGCGCAGGCGGAGCGCCTGTTCCTGGAGCTGCAGCACGACTATGCCGCCGAGTACAAGGAGTTCGGCCTGGCCGATCTGGCCGCCGGCGTCATTGCGCCGCTGCTGAAGCGGGAGCTGAGCGACTGGCAGCCCCTGGAGCAGCCGACGCAGCCGCTGGCGCTGATCAAGCGCTGGCGTTCCATTCTCCAGCCAGCCGAGCCCGAGCTGCCGGAGCAGCAGTCGCGCAACGTCTTCGATCCGTACTCGTCGCTCATCTGGGCGGGCGTGATGCCCTCGTTCCGGGCctgcgccgccagctggcAGCCCAAGGAGCACGCCCCGATGGCCGCCCTGCTGGACGCTTGGGCGCCCCTGCTGCCCACCTGGGTGCTGGACTCggtgctggagcagctggtgctgcCGCGTCTGACGGCGGGCGTGCGCGACTGGGATCCGCTGACGGACACGGTGCCCATACACAGCTGGATCCTGCCCTGGCACGCCATACTGGGCGGCAAGCTGGAGGTGTCCATCTATCCGCAGATACGCAGCAAGCTGGGCGTGGCTCTGCAGGCGTGGTCGCCGCAGGATCGATCGGCGCGCGCCATGCTGACGCCCTGGCAGACGGCCTTCCCCGAGGAGCAGCTGGTGCAGTTCCTCCTGCGCCACATCGTGCCCAAGCTGCAGGCGGTGCTCGCCGAGTTCGTGATCAATCCGCTGCAGCAGAATCTGGAGTTGTGGCAGCAGGTCTGGGAGTGGCACGAGCTGCTGCCCGCCGAGCACATGGCCCAGCTGCTGGACAAGCACTTCTTTCCGCGCTGGATGCAGGTCCTCGTCATGTGGCTCAACCAGTCGCCGGACTTTGCCGAGATCTCGCGCTGGTTTGCCGGCTGGAAGAGCATGCTCAGCGAGCCGATTCTCCGCGAGCCCTGCGTCAAGGAGCACCTGCGCCGCGCCCTGGACATGCTGCACCGCGCCACCGACGCGGTCCTCCAGCCCACCTCcgccccgccgccgcccatgcCGCCGGCGCCCGCTCCCGTGCTGCTCGCGCCCGTCATGCTCGTCGACGTCGTGCCGCCCGCGCAGCTGGAGTTCAAGGAGCTCGTCTCCCAGAAATGCGCCGAGCTGGGCATCATATTTGCCCCGCTGCCGGGACGACGCGAGCTGGGCAAACAGATCTATCGCGTGGGCAAACTCTTTTGCTACATCGATCGCAATGTTTGCATGCTGAGCGATGTCAGCTTTACCAATTGGCAGCCTGTGGCACTTAATCAACTCCTGGAGCGGGCACAAACGGGCATCATTTAG
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNESEGETVGRRGRRGLGGAAAGKPKDYTAPVNFVAGGIQQAGKKQKKKSQQEESAGSDEEASEAEDSDEARPSFGRKQPQLMDNSDANSSDSSVGPEEQPQRATMSSRSTAGLRHNSHIASTRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVGGQAKPLKLDEDVKEAKEFKEQLNKWKKGGNDARDKSGKRYYYKSVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQTKITPEETLYDEEKGTPASVFSMPELTHNLQLLVSQCEQEIIAIDKSERECADRQAGLEHEQDQLLELVQLERNHMSTLEAALTRLETLSESPELTVAQAERLFLELQHDYAAEYKEFGLADLAAGVIAPLLKRELSDWQPLEQPTQPLALIKRWRSILQPAEPELPEQQSRNVFDPYSSLIWAGVMPSFRACAASWQPKEHAPMAALLDAWAPLLPTWVLDSVLEQLVLPRLTAGVRDWDPLTDTVPIHSWILPWHAILGGKLEVSIYPQIRSKLGVALQAWSPQDRSARAMLTPWQTAFPEEQLVQFLLRHIVPKLQAVLAEFVINPLQQNLELWQQVWEWHELLPAEHMAQLLDKHFFPRWMQVLVMWLNQSPDFAEISRWFAGWKSMLSEPILREPCVKEHLRRALDMLHRATDAVLQPTSAPPPPMPPAPAPVLLAPVMLVDVVPPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDVSFTNWQPVALNQLLERAQTGII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476613;
90% Identity
iTF_00495851;
80% Identity
-