Zlin007730.1
Basic Information
- Insect
- Zaprionus lineosus
- Gene Symbol
- sip1
- Assembly
- GCA_035044505.1
- Location
- JAWNNX010000351.1:1362296-1364988[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-94 6.8e-90 301.6 14.3 2 275 423 693 422 693 0.97 2 2 0.27 2.7e+03 -2.2 0.0 159 193 707 738 699 748 0.50
Sequence Information
- Coding Sequence
- ATGTCGGACAATGAGTACGAACGTTTTGAAATCACAGACTATGATCTGGACAATGAGTTTAACATAAATAGACCACGCCGACGACAAACCAAGCACCAACAAATTTATGGTATTTGGGCTGACGATAGCGACAATGAGAGCGAGGGCGAGGTAAGTGGACGCCGTAGACGTCGCGGGCTAGGCGGTGGCACTTCTAGCAAAAGCAAGGACTACACCGCCCCTGTTAATTTTGTGGCCGGTGGCATACAACAAGCCGGCAAGAAACCGGCTAAGAAACAGTCTGAAAACGTCGGGAGCGACGAAGAAGGAAGTGATGTGGATGACAGCGATGACGCACGTCCATCATTTGGACGTAAGCAGCCACAGCTTATGGACAATAGTGACGAGAACAGCTCTGACAGCTCTAGGGACCGGGATGAACAAGTACGCCAGGAATCGATGTCGTCAAGACAAACAGCAGGCCTGAGGCACAAATCGCATGTAGCGAGTAACCGAAATGTAGGCGCCTGGGAGCAGCACACACGCGGCATTGGTGCGAAGCTGCTACTTCAAATGGGCTACAAGCCCGGTATGGGCCTCGGCAAGGACTTGCAGGGCATTGCCCAGCCGGTGCAGGCTCATGTCCGCAAAGGACGAGGAGCAATCGGCGCCTATGGACCAGAGACTGCTGCCAGTATTGGCGGACAAACGAAGGCAATTAAAGTGGACGAGGATGTTAAGGAGGCAAAGGAGTTTAAAGAGCAAATGAACAAGTGGAAGAAAGGTGGCAAAGAGTCCCGCGAAAAGTCCACCAAGCGTTACTATTACAAGTCCGTGGAAGAGGTAATAGCCAAGGGCAAGAAATCCGACTATCTACTATCAGAAAAGCTGAGCAAACGTCTGGGAAATGTGCCCGTCATTGATATGACTGGACCCGAGCGCCGTGTGCTCAGCGGATACCATGCGCTTGCCCAGAACAAAGTTGTAGCCGAGGAAACACTCTACGATGCACAGGGCGGAGAGGAAAAGGGAGAAAAAGTTACGCCCACTGTAGTATTCAGCATGCCGGAGCTTACACACAACCTGCAGTTGATTGTAAACCAATGTGAGCAGGAGATCATCGCCATAGACAAGGCAGAACGTGAGTCCTCCGATCGCCAGGCAGCTCTGGAGCacgagcagcggcagctgttgGAGTTGGTGCTGTTGGAGAAAAATCATATGACTACATTGGAGGGGGCACTCCTCCGTCTCGAAGAGCTGAGCGAAAACCCAGACCTGAGCCTGGCTCAGGCAGAGAAACTGTTCCTCGAGCTGCAGCATGATTATGCGGCGGAGTACAAGGAGTTTGGACTCGCCGACTTGGCTGCGGGCGTCATAGCTCCTTTACTGAAACGTGAACTAAGTGACTGGCACTCCCTGGAGCAACCAACCAAGCCGCTGCAGCTGATCAAACGCTGGTACAGCATTTTGCAGGTGGATGGACCGGAGGTGCCCGAGCAGCAATCGCGAAATGTCTTCGATCCGTACTCCTCGCTTATATGGGCAGGTGTGATGCCCTCGTTCAGAGCCTGTGCCGCCAGCTGGCAGCCCAAGGAATACGCGCCTATGGCCTCACTTCTGGACTCCTGGGCTCCACTGCTACCCACCTGGGTACTTGACTCTGTGCTGGAGCAACTGGTACTTCCACGCCTAACGGCAGGTGTACGCGAGTGGGATCCCCTGACTGACACGGTGCCCATACATAGTTGGATACTGCCCTGGCATGGAATATTGGGTGCCAAGCTGGAAGAGTCTATTTATCCACAGATACGCAGCAAACTGGGAGTGGCACTGCAATCGTGGTCACCGCAGGATCGTTCAGCACGTGCGATGCTCACACCCTGGAAGACTGCCTTTCCCGAGGAGCAGCTGGTCCAGTTCCTCCTGCACCACGTCATTCCCAAGCTACAAGCGGTGCTGGCGGAGTTTGTCATCAATCCAATGCAACAGAACATGGAACTCTGGCATCAGGTGTGGGAGTGGAATGAGCTGATTCCCACTTACTACATGGTGCAGCTGCTCGACAAGCACTTCTTCCCCAGATGGATGCAGGTCCTGGTTATGTGGCTCAATCAATCACCAGACTTTACTGAAATTTCCCGCTGGTATGCGGGCTGGAAGAATATGTTCAATGAGCAGATTCTCCGGGATCCTTGCATCAAGGAGCACTTACGGCGTGCCCTTGAAATGCTGCACCGTGCCACGGACGCCATCTTGCAACCAAGTGCCGCCCCGCCACCGCCCATCATACCCACGCCCGCTCCCGTTATGCTTACACCCGTTATGCTCGTTGATATTGCGGCGCCCGCTCAGTTGGAGTTCAAGGAACTCGTGTCCCAAAAGTGCGCCGAGCTGGGCATCATCTTTGCACCACTGCCGGGGCGACGCGAGCTTGGCAAACAGATCTACCGAGTGGGCAAGTTCTTCTGCTACATCGATCGGAACGTGTGCATGATGAGCGACAGCAGCCTCGCCAAGTGGCAGCCCGTGGCGCTTAATCAGCTGCTGGAACGTGCTCAGACCGGAATGTAA
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRQTKHQQIYGIWADDSDNESEGEVSGRRRRRGLGGGTSSKSKDYTAPVNFVAGGIQQAGKKPAKKQSENVGSDEEGSDVDDSDDARPSFGRKQPQLMDNSDENSSDSSRDRDEQVRQESMSSRQTAGLRHKSHVASNRNVGAWEQHTRGIGAKLLLQMGYKPGMGLGKDLQGIAQPVQAHVRKGRGAIGAYGPETAASIGGQTKAIKVDEDVKEAKEFKEQMNKWKKGGKESREKSTKRYYYKSVEEVIAKGKKSDYLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKVVAEETLYDAQGGEEKGEKVTPTVVFSMPELTHNLQLIVNQCEQEIIAIDKAERESSDRQAALEHEQRQLLELVLLEKNHMTTLEGALLRLEELSENPDLSLAQAEKLFLELQHDYAAEYKEFGLADLAAGVIAPLLKRELSDWHSLEQPTKPLQLIKRWYSILQVDGPEVPEQQSRNVFDPYSSLIWAGVMPSFRACAASWQPKEYAPMASLLDSWAPLLPTWVLDSVLEQLVLPRLTAGVREWDPLTDTVPIHSWILPWHGILGAKLEESIYPQIRSKLGVALQSWSPQDRSARAMLTPWKTAFPEEQLVQFLLHHVIPKLQAVLAEFVINPMQQNMELWHQVWEWNELIPTYYMVQLLDKHFFPRWMQVLVMWLNQSPDFTEISRWYAGWKNMFNEQILRDPCIKEHLRRALEMLHRATDAILQPSAAPPPPIIPTPAPVMLTPVMLVDIAAPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKFFCYIDRNVCMMSDSSLAKWQPVALNQLLERAQTGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- -
- 80% Identity
- -