Dniv015328.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila niveifrons
Gene Symbol
sip1
Assembly
GCA_035046325.1
Location
JAWNOC010000075.1:6467157-6470627[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.4e-97 3.6e-93 312.0 13.6 2 275 418 686 417 686 0.97
2 2 0.86 4.9e+03 -3.2 0.0 246 268 702 724 694 733 0.58

Sequence Information

Coding Sequence
ATGAATATGAACGATTTCGAAATCACGGACTATGATCTGGACAATGAGTTCAACATAAATCGACCTCGCCGACGCACCACGAAGCATCAGCAAATCTATGGTATTTGGGCGGATGACAGCGACAATGAAAGCGAAGGGGAAGCAGGCGGAAGACGAGGACGACGCGGCCTAGGTGGCGGCTCAACTGGCAAATCAAAAGATTACACAGCACCCGTGAGTTTTGTTGCCGGCGGAATTCAACAATccggcaaaaagcaaaaaaagaagcaggAGGAGAAGGCGTCAGAAGAGGCAGAGAACGACGGCGAGGGTGAAGAGAGTGAAGGCGAGGAAGTGCGTCCATCCTTCGGACGCCAGATCAGtgatgacaacagcaacgacagctcAACGGACGAGGATGAAAAGTCGCGCCAAGCGGCGAGGAATTCATCAAAGAATTCAATCGCAGGAATGCGGCATAACTCGCATCTGCCCAGTAGTCGAAATGTGGGTGCCTGGGAGCAGCATACACGCGGCATTGGtgccaagctgctgctgcaaatggGATACGAGCCGGGCAAAGGATTGGGCAAGGATCTGCAGGGTATTTCGCAGCCGGTGCAAGCCCATGTCCGCAAAGGACGCGGCGCCATTGGCGCCTATGGGCCTGAGGTGGCAGCCAGTATTGGCGGCCAGGGTCAAGGGAAACAAGGAAGAATCGAAGATGAAGCCAGAGAGTCAAAGGAGTCTAAGGAACAGCAAAACAAGTGGAGGAAAGGCGGCGGTGAGATGCGCGAAAAGCACGGAAAGCGTTATTACTACAAGTCCGTCGAGGAAGTGATAGCCAAAGGCAAGAAATCCGATCATCTGCTTGGCGAGAAGCTGAGCAAGCGCCTCGGCAATGTGCCTGTGATTGATATGACGGGACCAGAGCGTCGTGTGCTGAGCGGTTATCACGCCTTGGCCCAGAACAAGATCACGCCCGAGGAGACGCTTTACGAGGCACAAGAGGGCGAGCAGAAGAGCGCTCCAGCTTCGGTGTTTAGCATGCCCGAGTTGACGCACAACGTTCAGCTACTGGTGAGTCAATGCGAGCAGGAGATCATTGCCATAGACAAGACGGAGCGCGAGTGCGCCGACCGACAGGCTGCACTGCAGCACGAACAGTTCCAGCTGCAGGAGCTGGTGCAGTTGGAACGCAATCACATGACCACATTGCAGGAAGCGTTGGCGCGACTCGATCAACTCACCGAGAATCCCGAGTTGAGCTTGGCGCAGGCGGAGCAGCTGTTCCTGGAGCTGCAGCAGGATTATGCTGCAGAGTACAAGGAGTTCGGTATGGCGGATCTGGCAGCGGGCGTCATTGCGCCGCTGCTGAAGCGGGAGCTGAGCGATTGGCAACCGTTGGAGCAGCCCACGCAGCCTCTGCAGCTGATCAAGCGTTGGCGCGGCATTCTGCAACGTGGCGAGAGCGAGGAGCTATCGCGTAATGTCTTCGATCCCTACTCTTCGCTCATCTGGGCAGGAGTAATGCCCTCGTTTCGCTCATGCGCCGCCAGCTGGCAGCCCAAGGAGCATGCCCCGATGGCCGCGTTGTTGGATGCCTGGGCGCCACTGTTGCCCACCTGGGTGCTGGACTCGGTGCTGGAGCAGCTTGTGTTGCCGCGTCTAACAGTCGGCGTGCAGGAATGGGATCCTCTCACCGATACGGTGCCCATACACAGCTGGATTCTTCCCTGGCATGGCATCTTGGGCAGCAAGTTGGCCGAATCGATTTATCCGCAGATACGCAGCAAATTGGGCGTCGCCTTGCAGGCCTGGTCACCTCAGGATCGCTCGGCTCGCGCCATGTTGACGCCCTGGCGAGAAGCCTTTGCTCCCGATGaccagctgctgcagttccTATTGCGTCACATCATACCCAAGTTGCAGGCGGTGCTGGCAGAGTTTGTCATCAACCCGCTGCAGCAGAACTTGGAGCTGTGGCATCAGGTCTGGGAGTGGCATGAACTCATTCCTGCTTCCCACATGGCACAGCTGCTGGACAAGCATTTCTTTCCACGCTGGATGCAGGTGCTGGTCATGTGGCTCAATCAATCGCCCGACTATGCAGAGATCTCGCGTTGGTATGCGGGCTGGAAGAACATGTTCAGCGAGGACATCTTGCGAGAGCCCTGCATCAAGGAGCACTTGCGTCGTGCCCTCGAGATGTTGCATCGTGCCACAGATGCGGTATTGCAGACCACTTCGGCTCCTCCGCCTCCCATGCCACCTGCTCCCGCTCCTGTGCTGCTCACTCCTGTTATGCTGGTGGATGTGGTGCAGCCTGCGCAGCTGGAGTTCAAGGAGCTCGTCTCGCAGAAATGCGCCGAGATGGGCATCATCTTTGCCCCGCTTCCGGGCAGAAGAGAACTTGGCAAACAGATTTATCGTGTGGGCAAACTCTTCTGCTATATCGATCGTAATGTCTGCATGCTAAGCGACAGCAGCTTTACAAACTGGCAACCCGTGGGACTTACTCAATTACTGGAACGAGCACAGACTGgcattatttaa
Protein Sequence
MNMNDFEITDYDLDNEFNINRPRRRTTKHQQIYGIWADDSDNESEGEAGGRRGRRGLGGGSTGKSKDYTAPVSFVAGGIQQSGKKQKKKQEEKASEEAENDGEGEESEGEEVRPSFGRQISDDNSNDSSTDEDEKSRQAARNSSKNSIAGMRHNSHLPSSRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPEVAASIGGQGQGKQGRIEDEARESKESKEQQNKWRKGGGEMREKHGKRYYYKSVEEVIAKGKKSDHLLGEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKITPEETLYEAQEGEQKSAPASVFSMPELTHNVQLLVSQCEQEIIAIDKTERECADRQAALQHEQFQLQELVQLERNHMTTLQEALARLDQLTENPELSLAQAEQLFLELQQDYAAEYKEFGMADLAAGVIAPLLKRELSDWQPLEQPTQPLQLIKRWRGILQRGESEELSRNVFDPYSSLIWAGVMPSFRSCAASWQPKEHAPMAALLDAWAPLLPTWVLDSVLEQLVLPRLTVGVQEWDPLTDTVPIHSWILPWHGILGSKLAESIYPQIRSKLGVALQAWSPQDRSARAMLTPWREAFAPDDQLLQFLLRHIIPKLQAVLAEFVINPLQQNLELWHQVWEWHELIPASHMAQLLDKHFFPRWMQVLVMWLNQSPDYAEISRWYAGWKNMFSEDILREPCIKEHLRRALEMLHRATDAVLQTTSAPPPPMPPAPAPVLLTPVMLVDVVQPAQLEFKELVSQKCAEMGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDSSFTNWQPVGLTQLLERAQTGII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476613;
90% Identity
iTF_00553720;
80% Identity
-