Dpar006427.1
Basic Information
- Insect
- Drosophila paramelanica
- Gene Symbol
- sip1
- Assembly
- GCA_035043915.1
- Location
- JAWNMO010000542.1:91828-94531[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-98 4.3e-94 315.1 13.2 3 275 428 699 426 699 0.98 2 2 0.11 9.6e+02 -1.0 0.0 158 196 712 747 704 754 0.55
Sequence Information
- Coding Sequence
- ATGTCGGACAATGAATATGAGCGTTTTGAAATCACAGACTATGATTTGGACAACGAGTTCAACATAAATAGGCCACGCAGACGCCACACCAAGCACCAACAGACTTATGGCATTTGGGCGGATGACAGCGACAACGAGAGTGAGGGCGAAAGCAGCGGTCGGCGTGGCAGACGTGGCCTGGGTGGGGGTTCCGCTGGCAAGGCCAAGGATTACACAGCGCCGGTGAATTTCGTGGCCGGTGGCATTCAGCAAGCCggcaagaagcagaagaagaagaagagtcaGCAGGAGGAGAGTGGTGGCAGCGATGACGACGGAAGTGAAGCGGAGGACAGCGACGACGCGCGTCCCTCGTTTGGACGCAAGCAGCCGCAGCTAATGGACAACAGCGATGCAAACAGCTCGGACAGCTCCGCGGAGCGGGaggagcagccgcagcggGCGAAAATGTCGGCGAGAAGCACGGCAGGCCTCAGGCACAACTCGCACATACCGAGCACGCGCAATGTGGGCGCCTGGGAGCAGCATACACGCGGCATTGGCGCCAAGCTGCTCCTGCAAATGGGCTACGAACCCGGCAAGGGTCTGGGCAAGGATCTGCAGGGCATCTCGCAGCCGGTGCAGGCGCATGTGCGCAAAGGACGCGGCGCCATCGGCGCCTACGGACCAGAGACTGCGGCCAGCGTGGGCGGCCAGCCCAAGCCGCTCAAACTGGACGAGGATGTCAAGGAGGCCAAGGAGTTTAAGGAGCAGCTCAACAAGTGGAAAAAGGGCGGCAGCGACACTCGCGATAAGTCCAGCAAGCGCTACTACTACAAGTCCGTGGAAGAGGTCATTGCCAAGGGCAAAAAGTCGGATCATCTCCTCTCCGAAAAGCTGAGCAAGCGTCTGGGCAATGTTCCGGTCATAGACATGACCGGACCGGAGCGACGCGTGCTCAGCGGCTACCATGCCCTggcccaaaacaaaatcacGCCTGATGAGACGCTCTATGACGCACAGGCCGGCGAGGCTGAAAAGGGCGAGAAGAGCACGCCCGCCTCAGTGTTCAGCATGCCCGAGCTGACGCACaatctgcagctgctggtgaGCCAGTGCGAGCAGGAGATCATTGCCATTGACAAGTCGGAGCGGGAGTGCGCGGATCGCCAGGCGGGACTGGAGCACGAGCAGCGCCAGCTACTGGAACTGGTGCAGCTGGAGCGCAATCATATGAGCACGCTGCAGGCGGCGCTCTCGCGCCTCGATCAGCTCAGCGAGAATCCAGATCTGAGCGTGGCGCAGGCGGAGCGCCTGTTCCTCGAGCTGCAGCACGACTATGCCGCCGAGTACAAGGAGTTCGGACTGGCCGATCTGGCTGCGGGTGTCATTGCACCGCTGCTGAAGCGCGAGCTGAGCGATTGGCAGCCACTGGAGCAGCCGACCCAGCCGCTGACGCTGATCAAGCGCTGGCGTGGCATACTGCAGACGGGGGAGGATGATCCGCTGCTGGCGGAGCAGCAGACGCGCAATGTTTTCGATCCGTACTCGTCGCTCATCTGGGCGGGCGTGATGCCCTCGTTTAGGGCCTGCGCCGCCAGCTGGCAGCCCAAGGAACACGCGCCGATGGCGGCGCTGCTGGACGCCTGGGCGCCGCTGTTGCCCACCTGGGTGCTGGACTCGGTGCTGGAGCAGCTGGTGTTGCCGCGCCTGACGGCGGGCGTGCGCGACTGGGATCCGCTGACGGACACGGTGCCCATACACAGCTGGATTCTGCCCTGGCATGGCATACTGGGCGCCAAGCTGGAGCAGTCCATCTATCCGCAGATACGCAGCAAACTGGGTGTCGCACTGCAGGCGTGGTCACCGCAGGATCGATCGGCGCGCGCCATGCTGACGCCCTGGCAGGCGGCCTTCCCCGAGGAGCAGATGGTGCAGTTCCTGCTGCGCCACATCGTGCCCAAGCTGCAGGCGGTGCTCGCCGAGTTCGTGATAAATCCGCTGCAGCAGAATCTGGAGCTCTGGCAACAGGTGTGGGAGTGGCATGAGCTGCTGCCCGCCGAGCACATGGCCCAGCTGCTGGACAAGCATTTCTTTCCGCGCTGGATGCAGGTCCTCGTCATCTGGCTCAATCAGTCGCCGGACTTTGCCGAAATATCGCGATGGTACGCCGGCTGGAAGAGCATGCTCAGCGAACCGGTGCTGCGCGAGCCCTGCATCAAGGAGCATCTGCGTCGCGCTCTGGATATGCTGCACCGTGCCACCGACGCCATCCTCCAGCCCACATCTGCCCCGCCGCCGCCCATGCCGCCAGCGCCCGCTCCCGTACTGCTCGCACCCGTGATGCTCGTCGATGTGGTGCCGCCCGCTCAGCTCGAGTTCAAGGAGCTCGTCTCACAGAAGTGCGCCGAACTGGGCATCATATTCGCCCCACTGCCGGGAAGACGTGAACTGGGCAAACAGatTTATCGTGTGGGGAAACTTTTCTGCTACATCGATCGCAATGTTTGCATGTTGAGCGATGTCAGCTTTACAAATTGGCAGCCTGTGGCACTTAATCAACTGTTGGATCGGGCACAAACGGGCATTATTTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQTYGIWADDSDNESEGESSGRRGRRGLGGGSAGKAKDYTAPVNFVAGGIQQAGKKQKKKKSQQEESGGSDDDGSEAEDSDDARPSFGRKQPQLMDNSDANSSDSSAEREEQPQRAKMSARSTAGLRHNSHIPSTRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVGGQPKPLKLDEDVKEAKEFKEQLNKWKKGGSDTRDKSSKRYYYKSVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKITPDETLYDAQAGEAEKGEKSTPASVFSMPELTHNLQLLVSQCEQEIIAIDKSERECADRQAGLEHEQRQLLELVQLERNHMSTLQAALSRLDQLSENPDLSVAQAERLFLELQHDYAAEYKEFGLADLAAGVIAPLLKRELSDWQPLEQPTQPLTLIKRWRGILQTGEDDPLLAEQQTRNVFDPYSSLIWAGVMPSFRACAASWQPKEHAPMAALLDAWAPLLPTWVLDSVLEQLVLPRLTAGVRDWDPLTDTVPIHSWILPWHGILGAKLEQSIYPQIRSKLGVALQAWSPQDRSARAMLTPWQAAFPEEQMVQFLLRHIVPKLQAVLAEFVINPLQQNLELWQQVWEWHELLPAEHMAQLLDKHFFPRWMQVLVIWLNQSPDFAEISRWYAGWKSMLSEPVLREPCIKEHLRRALDMLHRATDAILQPTSAPPPPMPPAPAPVLLAPVMLVDVVPPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDVSFTNWQPVALNQLLDRAQTGII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- iTF_00495851;
- 80% Identity
- -