Dmer010503.1
Basic Information
- Insect
- Drosophila meridionalis
- Gene Symbol
- sip1_1
- Assembly
- GCA_035045145.1
- Location
- JAWNPG010000031.1:9451996-9455881[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-96 8.9e-93 310.9 14.3 4 275 427 697 424 697 0.96 2 2 0.22 1e+03 -0.9 0.0 158 193 710 742 703 752 0.56
Sequence Information
- Coding Sequence
- aTGTCTGACAACGAATACGAACGTTTTGAGATCACAGACTATGATTTGGACAATGAGTTTAATATAAACAGGCCACGCAGACGCCACACCAAGCATCAACAAATTTATGGCATTTGGGCCGATGACAGCGACAATGAGGGCGAAGAGGAGAGCAGCGGTCGCCGCGGCAGACGTGGCCTGGGCGGCGGCTCCTCCAGCAAGCCCAAGGATTACACCGCGCCCGTAAATTTCGTGGCCGGCGGGATTCAGCAAGCCggcaagaagcagaagaagaagcagctgcaGGAGGAGCACGCGGCCAGCGATGAGGATGGCAGCGCGGCGGATGACAGCGACGAGGCGCGACCCTCGTTTGGACGCAAACAGCCGCAGCTGATGGACGACAGCGATGCCAACAGCTCCGACAGCTCTGCGGAGCGGGAGGAGCCGGCGCCACGCCCCAAAATGTCCGCGAACAGCACTGCGGGATTACGCCACAATTCGCACATAGCGGGCAATCGGAATGTCGGTGCCTGGGAGCAGCATACGCGCGGCATTGGCGCCAAACTGCTGCTCCAAATGGGCTACGAGCCCGGCAAGGGTCTGGGCAAGGATTTGCAGGGTATCTCGCAGCCGGTGCAGGCCCACGTGCGCAAAGGACGCGGTGCCATCGGTGCCTATGGCCCAGAGACGGCGGCCAGTGTGCCCGGCCAGCCCAAGCAGCTGAAGCTAGACGAGGATGCCAGGGACACCAAGGAATCCAAGGAGCAACATAACAAATGGAAAAAAGGTGGCGGAGAAATCCGGGAAAAGAATGCCAAGCGCTACTACTACAAGTCCGTGGAGGAGGTCATTGCCAAGGGCAAGAAGTCGGATCACCTGCTCTCCGAGAAGCTGAGCAAGCGGCTCGGCAATGTGCCAGTGATAGACATGACCGGGCCGGAGAGGCGCGTGCTCAGCGGCTACCACGCCCTGGCCCAGAGCAAAATGACGCCCGAGGAGACGCTGTATGAGGCGCAGCCAGGTGAGGAGCACGCAGAGAAGTCCAAGCCCGTCTCCGTCTTCAGCATGCCGGAGCTGACGCACAATCTGCAGCTGCTCGTCAGCCAATGCGAGCAGGAGATCATCGCCATAGACAAGGAGGAGCGCGAGTGCTCCGATCGACAGGCGGCGCTGGTGCACGAGCagaagcagctgctggagctggtgcAGCTGGAGCGAAATCACATGAATACGCTGGAGGCGGCGCTGCTCCGCCTGGAGCAGCTCAGCGAGACGCCCGACCTGAGTCTAGTCCAGGCGGAGCGCCTGTTCCTGGAGCTGCAGCACGACTATGCGGCGGAGTACAAGGAGTTCGGACTGGCGGATCTGGCAGCGGGCGTCATTGCGCCGCTGCTGAAGCGGGAGCTCAATGATTGGCAGCCGCTGGAGCAGCCGacgcagccgctgcagctgatCAAGCGTTGGCGCGGCAtactgcagcaggagcaggagccggaCGGACTGACGGATCAGCAATCCCGCAACGTCTTCGATCCCTACTCCTCACTCATCTGGGCAGGCGTCATGCCCTCGTTCCGAGCGTGCGCCGCCAGCTGGCAGCCGAAGCAGCATGCTCCAATGGCGGCGCTGCTCGATGCCtgggcgccgctgctgcccacCTGGGTGCTGGACTCGGTGCTGGAGCAGCTGGTGCTGCCGCGCCTGACGGCGGGCGTGCGTGACTGGGATCCCCTGACTGATACTGTTCCCATTCACAGCTGGATCCTGCCCTGGCATGGCATATTGGGCGCCAAGCTGGAGGAGTCCATCTATCCGCAGATACGCAGCAaactgggcgtggcactgcaGGCCTGGTCACCGCAGGATCGTTCCGCACGCGCCATGCTCACGCCCTGGCTGTCAGCGTTCCCAGAGGAGCAACTGGTCCAGttcctgctgcgccacatcataCCCAAGCTGCAGGCGGTGCTCGCGGAATTCGTCATCAATCCGCTGCAGCAGAACCTGGAGCTGTGGCACCAGGTCTGGGAGTGGCACGAGCTCATACCCGCCCAGCACATGGCCCAGCTGCTGGACAAGCATTTCTTTCCGCGCTGGATGCAGGTGCTCGTCATCTGGCTCAATCAGGCGCCAGACTTTGCCGAGATCTCGCGCTGGTATGCCGGCTGGAAGAGCATGCTGAGTGAGTCGATTCTACGCGAACCCTGCATCAAGGAGCATCTGCGTCGTGCTTTGGACATGCTGCATCGTGCCACGGATGCCGTGCTCCAGCCCACTTcggccccgcccccgcccatGCCGCCAGCGCCCACTCCTGTCCTGCTCACGCCCGTGATGCTCGTCGATGTGGCGCCGCCCGCTCAGCTGGAGTTCAAGGAGCTTGTCTCGCAGAAGTGCGCCGAGCTGGGCATCATCTTTGCGCCGCTGCCAGGTCGAAGGGAACTGGGCAAACAGATCTACCGCGTGGGAAAACTGTTTTGCTATATTGATCGGAATGTTTGCATGCTAAGCGATATTAGCTTTACGAATTGGCAGCCGGTGGGATTGAATCAACTACTGGAACGTGCACAGACGGGCCTCATCTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNEGEEESSGRRGRRGLGGGSSSKPKDYTAPVNFVAGGIQQAGKKQKKKQLQEEHAASDEDGSAADDSDEARPSFGRKQPQLMDDSDANSSDSSAEREEPAPRPKMSANSTAGLRHNSHIAGNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVPGQPKQLKLDEDARDTKESKEQHNKWKKGGGEIREKNAKRYYYKSVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQSKMTPEETLYEAQPGEEHAEKSKPVSVFSMPELTHNLQLLVSQCEQEIIAIDKEERECSDRQAALVHEQKQLLELVQLERNHMNTLEAALLRLEQLSETPDLSLVQAERLFLELQHDYAAEYKEFGLADLAAGVIAPLLKRELNDWQPLEQPTQPLQLIKRWRGILQQEQEPDGLTDQQSRNVFDPYSSLIWAGVMPSFRACAASWQPKQHAPMAALLDAWAPLLPTWVLDSVLEQLVLPRLTAGVRDWDPLTDTVPIHSWILPWHGILGAKLEESIYPQIRSKLGVALQAWSPQDRSARAMLTPWLSAFPEEQLVQFLLRHIIPKLQAVLAEFVINPLQQNLELWHQVWEWHELIPAQHMAQLLDKHFFPRWMQVLVIWLNQAPDFAEISRWYAGWKSMLSESILREPCIKEHLRRALDMLHRATDAVLQPTSAPPPPMPPAPTPVLLTPVMLVDVAPPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDISFTNWQPVGLNQLLERAQTGLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- iTF_00544481; iTF_00549541; iTF_00479474; iTF_00551576; iTF_00493638; iTF_00493637; iTF_00473051; iTF_00554374; iTF_00532360; iTF_00572588; iTF_00509805; iTF_00568240; iTF_00586666; iTF_00599571; iTF_00516250; iTF_00559477; iTF_00476613; iTF_00512709; iTF_00540357; iTF_00582246; iTF_00519911; iTF_00502513; iTF_00546643; iTF_00573307;
- 80% Identity
- -