Zcap005340.1
Basic Information
- Insect
- Zaprionus capensis
- Gene Symbol
- sip1
- Assembly
- GCA_018903675.1
- Location
- JAEIFN010001071.1:8757064-8759752[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-96 4.2e-92 308.5 15.2 1 275 426 697 426 697 0.97 2 2 0.11 9.4e+02 -1.0 0.0 157 201 709 750 702 752 0.61
Sequence Information
- Coding Sequence
- ATGTCGGACAATGAGTACGAACGTTTTGAAATCACAGACTATGATCTGGACAACGAATTCAATATAAACAGACCACGGCGGCGTCACACCAAGCACCAGCAAATTTATGGCATTTGGGCAGATGACAGCGACAATGAGAGCGAGGGCGAAGGTAGCAATCGACGTGGACGCCGTGGCTTGGGCGGTGGCTCGTCTGGCAAGTCAAAGGATTACACTGCGCCAGTGAGCTTCGTTGCCGGTGGCATTCAGCAGGCCGGCAAAAAGAAAAAGAAGCCACAGAACGACGCCGGCAGCGAAGCCGAAGGCAGCGACGCAGACGCTGACAGTGATGAGGTGCGTCCATCGTTCGGGCGCAAGCAACCGCAGCTGATGGACAACAGCGATGCCAACAACAGTTCGGACAGCTCAGCGGAGGCAGCAGAGGAGCAGGCACCGCGCAAAGGAATCTCGGCCCGTAACACGGCGGGACTGAGGCACAACTCACACATTCCCAGCAATCGGAATGTGGGTGCCTGGGAGCAACATACGCGCGGCATAGGTGCCAAGCTGCTACTACAAATGGGTTACGAGCCCGGCAAGGGTCTTGGCAAGGATCTGCAAGGTATATCGCAGCCAGTGCAGGCCCATGTGCGCAAAGGTCGTGGTGCCATTGGTGCCTATGGCCCCGAGACTGCAGCCAGTGTGGGCGGTCAGGTGAAGGCACTGAAAATCGACGAGGACGTCAAGGAGGCAAAAGAGTTCAAGGAACAACTGAACAAATGGAAGAAAGGAGGCACGGAAACAACGCGTGAGAAGTCCTCGAAACGTTACTACTACAAATCCGTGGAGGAGGTCATTGCCAAGGGCAAGAAGTCGGATCATCTGATGTCCGAGAAACTAAGCAAGCGCCTTGGCAATGTGCCTGTCATAGACATGACGGGACCAGAGCGACGCGTGCTCAGTGGATATCATGCGCTTGCCCAGAACAAAATTGTGCCCGAGGAGTCGCTCTACGATGCACAGGGCGCAGGTGAGGAGACTGGGGAGAAGGCACCACCAGCCAGTGTCTTCAGCATGCCCGAGCTGACGCACAATCTGCAGCTGCTGGTGAGCCAGTGCGAGCAGGAGATAATTGGCATAGACAAGGCAGAGAGGGAGTGCTCGGATCGACAGGCGGCGCTGGAGCACGAACACCAGCAGTTGCAGGAGCTGGTGCACCTGGAGCGGAATCACATGACCACACTGCAGGGTGCTCTGGCTCGGCTCGAGGAGTTGAGCGAGAATCCCGAACTGAGTCTATCGCAAGCAGAGAAACTGTTCCTGGAGCTGCAACATGACTTTGCTGCGGAGTACAAAGAGTTCGGACTGGCTGATCTGGCAGCGGGTGTGATAGCGCCGCTGGTGAAGCGTGAACTGAGCGACTGGCAACCGCTGGAGCAGCCCACCAAGCCGCTGCAGCTGATCAAGCGTTGGCGTGGCATACTCCAGTCCGAGCTGGAGGCCGACGATGGCCAACAGTCGCGCAATGTCTTCGATCCCTACTCGTCGCTCATCTGGGCCGGCGTGATGCCCTCGTTCCGTGCGTGTGCCGCCAGTTGGCAGCCCAAGCAACACGCTCTAATGGCAGCTCTGCTCGATGCTTGGGCACCGCTGTTGCCCACTTGGGTGCTGGACTCGGTGCTGGAGCAGCTTGTGTTGCCACGACTCACGGTCGGTGTCTGCGAATGGGATCCCCTCACAGACACAGTGCCTATACACAGCTGGATATTGCCCTGGCATGGCATCTTGGGTGCCAAGCTGGAGGAGACCATCTATCCGCAGATACGCAGCAAACTGGTCGTGGCACTGCAGGCCTGGTCGCCACAGGATCGTTCGGCACGTGCCATGCTGACGCCCTGGAAGAGCGCCTTTGATGAGGAGCAGCTTGTGCAGTTCCTGCTGCGTCACATCATACCCAAGCTGCAGGCAGTGCTGGCCGAGTTCGTCATCAATCCACTGCAACAGAATCTGGAGCTATGGCATCAGGTGTGGGAATGGAACGAGCTAATACCCACCCAGCACATGGCTCAGCTGTTGGACAAGCACTTCTTTCCCCGCTGGATGCAAGTGCTTGTCATGTGGCTCAATCAGTCGCCAGACTATGCGGAGATCTCGCGCTGGTATGCCGGCTGGAAGAGCATGTTCAGTGAGGCCATTTTGCGTGAACCCAGCATCAAGGAGCATCTGCGTCGCGCTCTCGACATGCTGCACCGTGCCACAGATGCTGTGCTCCAACCCACAGCAGCTCCGCCTCCACCCATGCCGCCTGCACCGACTCCTGTGCTGCTGGCGCCCGTCATGCTGGTCGATGTGGTGCAGCCCGCTCAGTTGGAGTTCAAGGAGCTTGTCTCACAGAAATGCGCCGAACTGGGCATCATTTTTGCCCCACTGCCAGGCAGACGCGAGTTGGGCAAACAGATCTATCGCGTGGGCAAACTCTTCTGCTTTATCGACCGCAATGTCTGCATGCTCAGCGACAGCAGCCTGACAAACTGGCAGCCTGTTGCTCTTAATCAGCTCCTGGAACGCGCACAGACTGGCCTGCTCTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNESEGEGSNRRGRRGLGGGSSGKSKDYTAPVSFVAGGIQQAGKKKKKPQNDAGSEAEGSDADADSDEVRPSFGRKQPQLMDNSDANNSSDSSAEAAEEQAPRKGISARNTAGLRHNSHIPSNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVGGQVKALKIDEDVKEAKEFKEQLNKWKKGGTETTREKSSKRYYYKSVEEVIAKGKKSDHLMSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKIVPEESLYDAQGAGEETGEKAPPASVFSMPELTHNLQLLVSQCEQEIIGIDKAERECSDRQAALEHEHQQLQELVHLERNHMTTLQGALARLEELSENPELSLSQAEKLFLELQHDFAAEYKEFGLADLAAGVIAPLVKRELSDWQPLEQPTKPLQLIKRWRGILQSELEADDGQQSRNVFDPYSSLIWAGVMPSFRACAASWQPKQHALMAALLDAWAPLLPTWVLDSVLEQLVLPRLTVGVCEWDPLTDTVPIHSWILPWHGILGAKLEETIYPQIRSKLVVALQAWSPQDRSARAMLTPWKSAFDEEQLVQFLLRHIIPKLQAVLAEFVINPLQQNLELWHQVWEWNELIPTQHMAQLLDKHFFPRWMQVLVMWLNQSPDYAEISRWYAGWKSMFSEAILREPSIKEHLRRALDMLHRATDAVLQPTAAPPPPMPPAPTPVLLAPVMLVDVVQPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCFIDRNVCMLSDSSLTNWQPVALNQLLERAQTGLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- iTF_01554688;
- 80% Identity
- -