Dsub001772.1
Basic Information
- Insect
- Drosophila suboccidentalis
- Gene Symbol
- sip1
- Assembly
- GCA_037043435.1
- Location
- JBAMBK010000201.1:371566-374817[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-96 5.6e-92 308.5 14.6 1 275 431 702 431 702 0.98 2 2 0.56 6e+03 -3.2 0.0 245 269 717 741 710 747 0.71
Sequence Information
- Coding Sequence
- ATGTCGGACCAGGAATACGAACGTTTTGAAATCACCGACTATGATCTGGACAATGAGTTCAACATAAACAGACCGCGCAGACGCCACACCAAGCATCAGCAAATATATGGCATTTGGGCGGATGACAGCGACAATGAGAGTGAAGGCGAGAGCAGCGGACGGCGTGGACGCCGCGGCTTGGGCGGTGGCTCAGCGGGAAAGTCAAAGGATTACACAGCGCCCGTGAATTTCGTGGCCGGCGGAATTCAGCAAGCCGgcaagaagcagaagaagaaacaGCAGGAGGAGAACGCGGAGAGTGATGAGGAGCAGGGCAGCAATGCGGATAGCAATGACAGCGATGGGGCGCGTCCTTCGTTTGGCCGCAAGCAGCCGCAGTTGATGGACAACAGCGATGGCAACAGCTCCGACAGCTCGGCGGGAGCGGAGGAGCGCCAGCATCAGCCGCGGAAGGCGACGATGACGTCGTCACGTCAGACAGCCGGTCTTCGGCATAATTCCCACATTGCGAGTAATCGGAATGTGGGTGCATGGGAGCAGCACACGCGCGGAATTGGCGccaagttgctgctgcagatgGGCTACGAGCCCGGCAAGGGATTGGGTAAGGATCTGCAGGGTATCTCGCAGCCGGTGCAGGCGCATGTGCGTAAGGGACGCGGCGCCATTGGCGCCTATGGACCAGAGACAGCGCCTAGCGTTGGCGGACAGTCAAAGGCCCTGAAAAACGACGAGGGCGTCCAGGAGACCAAAGAGTCCAAGGAGCAACTCAACAAATGGCGGAAAGGCGGCGAGGCTCGTGAAAAGTCCAGCAAGCGATACTACTACAAATCCGTGGAGGAAGTCATTGCCAAGGGCAAGAAATCCGATCACTTGCTGTCGGAGAAGCTGAGCAAGCGGCTCGGCAATGTTCCAGTGATTGATATGACTGGACCGGAGCGACGTGTGCTCAGCGGATATCATGCCCTGGCCCAGAACAAAATCACGCCCGAGGAGACGTTGTATGATGCAcagggaatgggaatggaagaGAAGGGGGAAAAGAGCACGGCCGTGTCCGTATTCAGCATGCCCGAGCTGACCCACAATCTGCAGCTGCTGGTGAGCCAATGCGAGCAGGAGATCATTGCCATAGACAAGACGGAGCGGGAGTGTGAGGATCGGCAAGCGGCGTTGGAGCATGAGCAGCATCAGCTGCTGGAACTGGTGCAGCTGGAGCGCAATCACATGACCACGCTGCAAGCGACCCTCGCCCGCCTCGAGCAGCTCAGCGAGAATCCGGAGCTGAGTCTGTCGCAGGCGGAGCAACTGTTTCTCGAGCTGCAGCACGACTATGCGGCAGAGTACAAAGAATTCGGCTTGGCCGATCTGGCAGCGGGTGTCATAGCGCCGCTCCTGAAGCGGGAACTCAGCGATTGGCAGCCGTTGCTGGAGCCCACGCAGCCAGTGCAGCTGATCAAGCGATGGCGCGGCATATTGCAGCCGGATGGACCCGATGTGTCGGAGCAACAGTCGCGCAATATATTTGATCCCTACTCCTCGCTGATCTGGGCTGGCGTGATGCCCTCGTTCAGAGCCTGCGCCGCCAGCTGGCAGCCAAAGGAGCATGCCTTAATGGCAGCTCTGCTGGACGCCTGGGCGCCCCTGTTGCCCACTTGGGTGCTGGACTCGGTGCTGGAGCAGCTGGTGCTGCCGCGACTCACGATTGGCGTCAGCGAATGGGATCCCCTGACCGATACTGTGCCCATACACAGCTGGATCCTGCCATGGCATGCCATACTGGGGCCCAAGCTGGAGGAGTCCATCTATCCGCAGATTCGGAGCAAGCTGGGCGTTGCACTGCAGGCCTGGTCGCCGCAGGATCGGTCAGCACGCGCCATGCTGACGCCCTGGCAAACGGCCTTCGCCGAGGAGCAGCTGGTCCAGTTCCTGCTGCGTCACATCATACCCAAGCTGCAGGCGGTGCTCGCCGAGTTCGTGATCAATCCGCTGCAACAGAATCTGGAGCTGTGGCATCAGGTGTGGGAGTGGCACGAGCTCATACCCGCCCATCACATGGCCCAGCTGCTGGACAAACATTTCTTTCCGCGCTGGATGCAGGTGCTCGTCATGTGGCTGAATCAGTCGCCGGACTATGCGGAAATCTCGCGCTGGTATGCCGGCTGGAAGAGCATGTTCAGTGAGCCGATACTCCGGGAGCCCTGCATCAAGGAGCACTTGCGTCGCGCCCTCGACATGCTGCACCGTGCCACCGACGCCGTGCTGCAGACCACCACAGCACCGCCGCCACCCATGCCACCAGCACCCGCGCCCGTGCTCCTCACACCCGTCATGCTCGTCGACGTGGCGCCACCAGCCCAACTGGAATTCAAGGAGCTCGTCTCGCAGAAATGCGCCGAACTGGGCATCATATTCGCCCCACTTCCAGGTCGACGGGAACTGGGCAAACAGATCTACCGCGTGGGCAAACTCTTCTGCTACATCGATCGCAATGTTTGCATGCTGAGCGACAGCAGCTTTGCGAATTGGCAGCCCGTGGGACTTAGTCAGTTGCTGGAACGGGCACAAACTGGGCTTCTTTAG
- Protein Sequence
- MSDQEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNESEGESSGRRGRRGLGGGSAGKSKDYTAPVNFVAGGIQQAGKKQKKKQQEENAESDEEQGSNADSNDSDGARPSFGRKQPQLMDNSDGNSSDSSAGAEERQHQPRKATMTSSRQTAGLRHNSHIASNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAPSVGGQSKALKNDEGVQETKESKEQLNKWRKGGEAREKSSKRYYYKSVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKITPEETLYDAQGMGMEEKGEKSTAVSVFSMPELTHNLQLLVSQCEQEIIAIDKTERECEDRQAALEHEQHQLLELVQLERNHMTTLQATLARLEQLSENPELSLSQAEQLFLELQHDYAAEYKEFGLADLAAGVIAPLLKRELSDWQPLLEPTQPVQLIKRWRGILQPDGPDVSEQQSRNIFDPYSSLIWAGVMPSFRACAASWQPKEHALMAALLDAWAPLLPTWVLDSVLEQLVLPRLTIGVSEWDPLTDTVPIHSWILPWHAILGPKLEESIYPQIRSKLGVALQAWSPQDRSARAMLTPWQTAFAEEQLVQFLLRHIIPKLQAVLAEFVINPLQQNLELWHQVWEWHELIPAHHMAQLLDKHFFPRWMQVLVMWLNQSPDYAEISRWYAGWKSMFSEPILREPCIKEHLRRALDMLHRATDAVLQTTTAPPPPMPPAPAPVLLTPVMLVDVAPPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDSSFANWQPVGLSQLLERAQTGLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- iTF_00533792;
- 80% Identity
- -