Dfor008001.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila formosana
Gene Symbol
sip1
Assembly
GCA_035045625.1
Location
JAWNOW010000311.1:4202288-4205777[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-97 9.7e-94 314.0 14.6 4 275 430 698 427 698 0.97
2 2 0.88 7.6e+03 -3.9 0.0 245 269 713 737 708 743 0.65

Sequence Information

Coding Sequence
ATGTCGGACAATGAATACGAACGCTTCGAAATCACAGACTACGATCTGGACAATGAGTTCAACATCAACAGGCCACGCAGGCGTACCACAAAGCACCAGCAAATCTATGGCATTTGGGCGGatgacagcgacaacgagaGCGAGGGCGACACCGGCGGACGACGTGGACGGCGTGGCCTAGGCGGCGGATCAGCGGGAAAGTCAAAGGACTACACGGCGCCCGTGAGTTTTGTGGCCGGCGGAATTCAACAAGCCGGCAAGAAGCCGAAAAAGAAGCTGGAGGAGAAGGCGGCGGGCAGCGAAGAGGAGGCGAGCGATGGTGATGGCGATGGTGGAAGTGAGGACGAGGGACGTCCGTCGTTTGGACGCAAGCAGCCACAGCTGATGGACAACAGCGatgccaacagcagcgacagctcAGCGGAGGCTCAGGAGGAAAAGAAGGCACGCCAGGCGGCGTCGATGTCGTCGAGGAACATTGCAGGCATGCGGCACAGCTCGCACCTGCCCAGCAGCCGCAATGTGGGCGCCTGGGAGCAGCATACACGCGGCATTGGCGccaagttgctgctgcaaatggGCTACGAGCCTGGCAAGGGATTGGGCAAGGATCTGCAGGGCATTTCGCAGCCGGTGCAGGCGCATGTGCGCAAAGGACGCGGCGCCATTGGCGCCTATGGCCCCGAGACGGCAGCCAGCATTGGCGGCAAGGGCAGCAAGCCGCAGAGAATCGAAGATGAGGCGAGGGACACCAAGGAGTCCAAGGATCAGCTCAACAAGTGGCGCAAAGGCGGCGGCGAGGCGCGCGAAAAGTCTAGCAAGCGTTACTACTACAAGTCCGTGGAGGAAGTGATTGCCAAGGGCAAGAAATCCGATCATCTGCTCTCCGAGAAGCTGAGCAAACGACTCGGCAACGTTCCCGTGATCGACATGACCGGTCCCGAGCGTCGTGTGCTCAGCGGCTACCATGCGCTGGCCCAGAACAAGATCACGCCCGAGGAGACGCTCTACGAGGCGCAGGACGAGCTGAAGAGCGCCCCGATCTCGGTGTTCAGCATGCCCGAGCTGACGCACAACGTCCAGCTGCTGGTGAGCCAATGCGAGCAGGAGATCATCGCCATAGACAAGACGGAGCGCGAGTGCGCCGATCGCCAGGCGGCGCTGCAGCACGAACAGTATCAGCTGCAGGAGCTCGTGCAGCTGGAGCGCAATCACATGACCACATTGCAGGCGGCCTTGGCCCGCCTCGATCAGCTCAGCGAGAATCCCGAGCTGAGCCTGGTGCAGGCGGAGAAACTGTTCCTGGAGCTGCAACATGACTATGCGGCCGAGTACAAGGAGTTTGGCATGGCGGATCTGGCAGCGGGCGTCATTGCGCCGCTGCTGAAGCGCGAGCTGAGCGATTGGCAGCCGCTCGAGCTGCCCAcgcagccgctgcagctgaTCAAGCGCTGGCGCGGCATTTTGCAGCGCGATGGCGAGGAGTCGGAGGAGCAGCAGTCCCGCAATGTCTTCGATCCGTACTCCTCGCTCATCTGGGCGGGCGTGATGCCCTCGTTCCGCGCCTGCGCCGCCAGCTGGCAGCCCAAGGAGCATGCGCCGATGGCTGCGCTGCTGGACGCCTGggcgccgctgctgcccaCCTGGGTGCTGGACTCGGTGCTGGAACAGTTGGTGCTGCCGCGCCTCACAGTCGGCGTGCAGGAGTGGGATCCGCTGACGGACACGGTGCCCATTCACAGCTGGATACTGCCGTGGCACGGCATCCTGGGCAGCAAGCTGGAGGAGTCCATTTATCCGCAGATTCGCAGCAAACTGGGCGTCGCTCTGCAGGCGTGGTCGCCGCAGGACCGCTCGGCACGCGCCATGCTGACGCCTTGGCAAGCTGCCTTTGCCGAGGAGCAGCTGGTGCAGTTCCTGCTGCGGCACATCATCCCCAAGCTGCAGGCGGTGCTGGCGGCGTTTGTCATCAATCCGATGCAGCAGAACTTGGAGCTGTGGCATCAGGTCTGGGAGTGGCATGAATTGATTCCCGCCCACCACATGGCTCAGCTGCTGGACAAGCACTTCTTCCCCCGCTGGATGCAGGTGCTCGTCATGTGGCTGAATCAGTCGCCCGACTATGCGGAGATCTCCCGCTGGTATGCCGGCTGGAAGAACATGTTCAGCGAGCCCATCTTGCGGGAGCCCTGCATCAAGGAGCACTTGCGTCGCGCCCTCGAGATGCTGCATCGCGCCACCGACGCCGTGCTGCAAACCACTTCGGCTCCCCCGCCACCCATGCCGCCCGCCCCTGCTCCTGTGCTCCTCACCCCCGTCATGCTGGTGGATGTTGCGCAGCCTGCTCAGCTGGAGTTCAAGGAGCTCGTCTCGCAGAAGTGCTCCGAGCTGGGCATCATCTTTGCCCCACTGCCAGGCAGGCGAGAGCTGGGCAAGCAGATCTATCGTGTGGGCAAACTCTTCTGCTATATCGATCGTAATGTCTGCATGTTGAGCGACAGCAGCTTTACAAACTGGCAACCCGTAGGACTTGCTCAGCTACTGGAACGCGCACAGACTGGCATTATTTAg
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRRRTTKHQQIYGIWADDSDNESEGDTGGRRGRRGLGGGSAGKSKDYTAPVSFVAGGIQQAGKKPKKKLEEKAAGSEEEASDGDGDGGSEDEGRPSFGRKQPQLMDNSDANSSDSSAEAQEEKKARQAASMSSRNIAGMRHSSHLPSSRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKGSKPQRIEDEARDTKESKDQLNKWRKGGGEAREKSSKRYYYKSVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKITPEETLYEAQDELKSAPISVFSMPELTHNVQLLVSQCEQEIIAIDKTERECADRQAALQHEQYQLQELVQLERNHMTTLQAALARLDQLSENPELSLVQAEKLFLELQHDYAAEYKEFGMADLAAGVIAPLLKRELSDWQPLELPTQPLQLIKRWRGILQRDGEESEEQQSRNVFDPYSSLIWAGVMPSFRACAASWQPKEHAPMAALLDAWAPLLPTWVLDSVLEQLVLPRLTVGVQEWDPLTDTVPIHSWILPWHGILGSKLEESIYPQIRSKLGVALQAWSPQDRSARAMLTPWQAAFAEEQLVQFLLRHIIPKLQAVLAAFVINPMQQNLELWHQVWEWHELIPAHHMAQLLDKHFFPRWMQVLVMWLNQSPDYAEISRWYAGWKNMFSEPILREPCIKEHLRRALEMLHRATDAVLQTTSAPPPPMPPAPAPVLLTPVMLVDVAQPAQLEFKELVSQKCSELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDSSFTNWQPVGLAQLLERAQTGII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476613;
90% Identity
iTF_00589537; iTF_00614177; iTF_00595235; iTF_00520620;
80% Identity
-