Dfla012631.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila flavopinicola
Gene Symbol
sip1
Assembly
GCA_035042425.1
Location
JAWNLL010000454.1:1073515-1077181[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.4e-97 3.1e-93 312.4 14.9 3 275 426 696 424 696 0.97
2 2 0.29 2.6e+03 -2.3 0.0 245 269 711 735 702 750 0.68

Sequence Information

Coding Sequence
ATGTCGGACAATGAATACGAGCGCTTTGAGATCACGGACTATGATCTGGACAACGAGTTTAACATAAACCGACCACGTAGACGTCACACCAAGCACCAGCAAATCTACGGCATTTGGGCGGATGACAGCGACAACGAGAGCGAGGGCGAGAGCAGCGGTCGCCGTGGCAGGCGAGGCCagggtgctggtggtgctggcaaGCCCAAGGACTACACGGCGCCCGTTAATTTCGTAGCCGGCGGAATTCAGCAAGCCGgcaagaagacgaagaagaagcagctggaggaggGTCGAGCGGGCAGTGTAGATGAGGGGGGCAGTGAGGCGGGCGACAGCGACGAGGGGCGTCCCTCATTCGGGCgcaagcagccgcagctgctggACAACAGCGATGTGAACAGTTCCGACAGTGAGGAGGATCAGCAGCCGCAAGTGAAGGAGCCGCCGCAGATATCGGCAAGGAGCACCGCAGGACTGCGGCACAATTCGCACATAGCCAGCAACCGGAATGTGGGTGCCTGGGAGCAGCATACGCGCGGCATTGGCGCCAAACTGCTGCTCCAGATGGGCTACGAGCCCGGCAAGGGTCTGGGCAAGGATCTGCAGGGTATATCGCAGCCGGTGCAGGCGCACGTGCGCAAGGGACGCGGCGCAATCGGCGCTTATGGCCCCGAGACGGCGGCCAGCATTGGCGGCCAGCCGAAGCCCCAGAGGATTGACGAGGACCTGAAGGAGGCCAAGGAGTTCAAGGAGCAGCTCAACAAGTGGAAGAAAGGCGGTAACGAGACGCGCGAGCGGCCCAGTAAGCAGCGCTACTACTACAAGTCCGTGGAAGAGGTCATTGCCAAGGGAAAGAGATCGGATCATCTGCTCTCCGAGCAGCTCAGCAAGCGGCTGGGCAACGTGCCTGTAATCGACATGACCGGGCCCGAGCGTCGCGTCCTCAGCGGCTACCATGCACTTGCCCAGAACAAGATCACGCCCGAGGAGACGCTCTACGACGAGCAGGCGGGCGCGGAGAAGGGTGCGCCCGTCAGCGTCTTCAGCATGCCTGAGCTGACGCACAacctgcagctgctggtgaGCCAGTGCGAGCAGGAGATCATTGCCATCGACAAGGCGGAGCGTGAGTGTGCAGATCGTCAGGCGGCGCTGGAGCACGAGCAGCGGCAACTGCTCGAACTGGAGCTACTGGAGCGCAACCACATGGCTACGCTGGAGGCGGCGCTGGGCCGACTCGACGAGCTCAGCGAGAACCCGGAGCTGAGCCTGCTGCAGGCGGAGCAGCTGTTCCGCGAGCTGCAGCACGACTATGCCGCCGAGTATCTGGAGTTCGGGCTGGCGGATCTGGCGGCGGGCGTGATAGCGCCGCTGCTAAAGCGGGATCTGAGTGACTGGGTGCCGCTGGAGCAGCCCACGCAGCACATACAGCTGATCAAGCGCTGGCGCGGCAtactgcagcaggagcaggcgcaGCCGGAGAGAGAGGAGCAGTCGCGCAACGTCTTCGATCCGTACTCCTCGCTGATCTGGGCGGGTGTCATGCCCTCGTTCCGCGCCTGCGCCGCCACCTGGCAGCCCAAGGAGCACGCCCCAATGGCCGCCCTGCTGGACGCCtgggcgccgctgctgcccacCTGGGTGCTGGACTCTGTGCTGGAACAGCTAGTGCTGCCCCGCCTGAATGCCGGCGTCCGTGACTGGGATCCGCTGACGGACACGGTGCCCATCCACAGCTGGATACTGCCCTGGCACGCCATACTGGGCGGCAAGCTGGAGGAATCCATCTACCCGCAGATACGCAGCAAGCTGGGCGTGGCGCTGCAGGCCTGGTCACCGCAGGATCGCTCCGCCCGCGCCATGCTCACGCCCTGGCAGGCGGCCTTTCCCccggagcagctgctgcagttcctGCTGCGCCACATCATACCCAAGCTGCAGGCGGTGCTCGCCGAGTTCGTGATCAATCCGCTGCAGCAGAACCTGGAGCTGTGGCAGCAGGTGTGGGAGTGGCACGAGCTCCTTCCCGCTCCCCACATGGCGCAGCTACTGGACAAGCACTTCTTTCCGCGCTGGATGCAGGTGCTCGTCATGTGGCTCAATCAGTCGCCGGACTTTGCCGAGATCTCGCGCTGGTATGCCGGCTGGAAGAGCATGTTCAGCGAGCCCGTGCTGCGCGAGCCCTGCATCAAGGAGCACCTGCGTCGCGCCCTCGACATGCTGCATCGCGCCACGGATGCAGTGCTGCAGCCCGGCTCTGGCCCGCCGCCGCCCATGCCgcctgctcccgctcccgtGCTGCTCGCCCCGCCCGTCATGCTCCTGGATGTGGCGCCGCCCGCCCAGCTTGAGTTCAAGGAGCTCGTCTCGCAGAGGTGTGCCGAGCTGGGCATTATATTCGCACCGCTGCCGGGACGTCGTGAGCTGGGCAAACAGATTTACCGTGTGGGCAAACTTTTCTGCTTCATCGATCGCAATGTTTGCATGCTAAGCGATAGCAGCTTTACCAATTGGCAGCCAGTGGCACTCAATCAGCTCCTGGAGCGTGCTCAGACTGGCCTTCTCTAA
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNESEGESSGRRGRRGQGAGGAGKPKDYTAPVNFVAGGIQQAGKKTKKKQLEEGRAGSVDEGGSEAGDSDEGRPSFGRKQPQLLDNSDVNSSDSEEDQQPQVKEPPQISARSTAGLRHNSHIASNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGQPKPQRIDEDLKEAKEFKEQLNKWKKGGNETRERPSKQRYYYKSVEEVIAKGKRSDHLLSEQLSKRLGNVPVIDMTGPERRVLSGYHALAQNKITPEETLYDEQAGAEKGAPVSVFSMPELTHNLQLLVSQCEQEIIAIDKAERECADRQAALEHEQRQLLELELLERNHMATLEAALGRLDELSENPELSLLQAEQLFRELQHDYAAEYLEFGLADLAAGVIAPLLKRDLSDWVPLEQPTQHIQLIKRWRGILQQEQAQPEREEQSRNVFDPYSSLIWAGVMPSFRACAATWQPKEHAPMAALLDAWAPLLPTWVLDSVLEQLVLPRLNAGVRDWDPLTDTVPIHSWILPWHAILGGKLEESIYPQIRSKLGVALQAWSPQDRSARAMLTPWQAAFPPEQLLQFLLRHIIPKLQAVLAEFVINPLQQNLELWQQVWEWHELLPAPHMAQLLDKHFFPRWMQVLVMWLNQSPDFAEISRWYAGWKSMFSEPVLREPCIKEHLRRALDMLHRATDAVLQPGSGPPPPMPPAPAPVLLAPPVMLLDVAPPAQLEFKELVSQRCAELGIIFAPLPGRRELGKQIYRVGKLFCFIDRNVCMLSDSSFTNWQPVALNQLLERAQTGLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476613;
90% Identity
-
80% Identity
-