Dmea010111.1
Basic Information
- Insect
- Drosophila melanica
- Gene Symbol
- sip1
- Assembly
- GCA_004143765.1
- Location
- SCDT01000706.1:49259-52073[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-98 5.2e-94 315.1 13.2 3 275 428 699 426 699 0.98 2 2 0.13 1.3e+03 -1.1 0.0 158 193 712 744 704 754 0.53
Sequence Information
- Coding Sequence
- ATGTCGGACAATGAATATGAGCGTTTTGAAATCACAGACTATGATTTGGACAACGAGTTCAACATAAATAGGCCACGCAGACGCCACACCAAGCACCAACAGACTTATGGCATTTGGGCGGATGACAGCGACAACGAGAGTGAGGGCGAAAGCGGCGGACGGCGTGGCAGACGTGGCCTGGGTGGCGGTTCCGCTGGCAAGGCCAAGGATTACACGGCGCCGGTGAATTTCGTGGCCGGTGGAATTCAGCAAGCCggcaagaagcagaagaagaagaagagtcaGCAGGAGGAGAGCGCTGGCAGCGATGATGACGGAAGCGAAGCGGAGGACAGCGACGACGCGCGTCCCTCGTTTGGACGcaagcagccgcagctgatGGACAACAGCGATGCAAACAGCTCGGACAGCTCCGCGGAGCGGgaggagcagccgcagcgagCGAAAATGTCGGCGAGAAGCACGGCAGGACTCAGGCACAACTCGCACATACCGAGCACGCGCAATGTGGGCGCCTGGGAGCAGCATACACGCGGCATTGGCGCCAAGCTGCTCCTGCAAATGGGCTACGAACCCGGCAAGGGTCTGGGCAAGGATCTGCAGGGCATCTCGCAGCCGGTGCAGGCGCATGTGCGCAAAGGACGCGGCGCCATCGGCGCCTACGGACCAGAGACTGCGGCCAGCGTGGGCGGCCAGCCCAAGCCGCTCAAACTGGACGAGGATGTCAAGGAGGCCAAGGAGTTCAAGGAGCAGCTCAACAAGTGGAAGAAGGGCGGCACCGACACTCGCGATAAGTCCAGCAAGCGCTACTACTACAAGTCCGTGGAAGAGGTCATTGCCAAGGGCAAAAAGTCCGATCATCTGCTCTCCGAAAAGTTGAGCAAGCGCCTGGGCAATGTTCCGGTCATAGACATGACCGGACCGGAGCGACGCGTGCTCAGCGGCTACCATGCTCTggcccaaaacaaaatcacGCCCGACGAGACGCTCTACGACGCACAGGCCGGCGAGGCTGAGAAGGGCGAGAAGAGCACGCCCGCCTCAGTGTTCAGCATGCCCGAGCTGACGCAcaatctgcagctgctggtgaGCCAGTGCGAGCAGGAGATCATTGCCATTGACAAGTCGGAGCGGGAGTGCTCGGATCGCCAGGCGGCACTGGAGCacgagcagcgccagctgctggaACTGGTGCAGCTGGAGCGGGATCATATGAGCACGCTGCAGGCGGCGCTCTCGCGCCTCGACCAGCTCAGCGAGAACCCGGATCTGAGCGTGGCGCAGGCGGAGCGCCTCTTTCTCGAACTGCAGCACGACTATGCCGCCGAGTACAAGGAGTTCGGACTGGCCGATCTGGCTGCGGGCGTCATTGCGCCGCTGCTGAAGCGCGAGCTGAGCGACTGGCAGCCACTGGAGCAGCCGACGCAGCCGCTGACGCTGATCAAGCGCTGGCGTGGCATTCTGCAGACGGGGGAGGATGATCCGCTGCTGGCGGAGCAGCAGACGCGCAATGTTTTCGATCCGTACTCGTCGCTCATCTGGGCGGGCGTGATGCCCTCGTTTAGGGCCTGCGCCGCCAGCTGGCAGCCCAAGGAGCATGCGCCGATGGCGGCGCTGCTGGACGCCTGGGCGCCGCTGTTGCCCACCTGGGTGCTGGACTCGGTGCTGGAGCAGCTGGTGCTGCCGCGCCTGACGGCGGGCGTGCGCGACTGGGATCCGCTGACGGACACGGTGCCCATACACAGCTGGATCCTGCCCTGGCATGGCATACTGGGCGCCAAGCTGGAGCAGTCCATCTACCCGCAGATACGCAGCaaactgggcgtggcactgcaGGCGTGGTCGCCGCAGGATCGATCGGCGCGCGCCATGCTGACGCCCTGGCAGGCGGCCTTCCCCGAGGAGCAGATGGTGCAGTTCCTGCTGCGCCACATCGTGCCCAAGCTGCAGGCGGTGCTCGCCGAGTTCGTGATCAATCCGCTGCAGCAGAATCTGGAGCTCTGGCAGCAGGTGTGGGAGTGGCACGAGCTGCTGCCCGCCGAGCACATGGCCCAGCTGCTGGACAAGCACTTCTTTCCGCGCTGGATGCAGGTCCTCGTCATCTGGCTCAATCAGTCGCCGGACTTTGCCGAAATATCGCGCTGGTACGCCGGCTGGAAGAGCATGCTCAGCGAACCGGTGCTGCGCGAACCGTGCATCAAGGAGCATCTGCGTCGCGCTTTGGACATGCTGCACCGTGCCACCGACGCCGTCCTCCAGCCCACATCTGCCCCGCCGCCGCCCATGCCGCCAGCGCCCGCTCCCGTACTGCTCGCACCCGTGATGCTCGTCGATGTGGTGCCGCCCGCTCAGCTCGAGTTCAAAGAGCTCGTCTCACAGAAGTGCGCCGAACTGGGCATCATCTTCGCCCCACTGCCGGGAAGACGTGAACTGGGCAAACAGatTTATCGTGTGGGCAAACTCTTTTGCTATATCGATCGCAATGTTTGCATGTTGAGCGATGTCAGCTTCACAAATTGGCAGCCTGTTGCACTTAATCAACTGTTGGATCGGGCACAAACGGGCATTATTTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQTYGIWADDSDNESEGESGGRRGRRGLGGGSAGKAKDYTAPVNFVAGGIQQAGKKQKKKKSQQEESAGSDDDGSEAEDSDDARPSFGRKQPQLMDNSDANSSDSSAEREEQPQRAKMSARSTAGLRHNSHIPSTRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVGGQPKPLKLDEDVKEAKEFKEQLNKWKKGGTDTRDKSSKRYYYKSVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKITPDETLYDAQAGEAEKGEKSTPASVFSMPELTHNLQLLVSQCEQEIIAIDKSERECSDRQAALEHEQRQLLELVQLERDHMSTLQAALSRLDQLSENPDLSVAQAERLFLELQHDYAAEYKEFGLADLAAGVIAPLLKRELSDWQPLEQPTQPLTLIKRWRGILQTGEDDPLLAEQQTRNVFDPYSSLIWAGVMPSFRACAASWQPKEHAPMAALLDAWAPLLPTWVLDSVLEQLVLPRLTAGVRDWDPLTDTVPIHSWILPWHGILGAKLEQSIYPQIRSKLGVALQAWSPQDRSARAMLTPWQAAFPEEQMVQFLLRHIVPKLQAVLAEFVINPLQQNLELWQQVWEWHELLPAEHMAQLLDKHFFPRWMQVLVIWLNQSPDFAEISRWYAGWKSMLSEPVLREPCIKEHLRRALDMLHRATDAVLQPTSAPPPPMPPAPAPVLLAPVMLVDVVPPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDVSFTNWQPVALNQLLDRAQTGII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- iTF_00495851;
- 80% Identity
- -