Drel014761.1
Basic Information
- Insect
- Drosophila rellima
- Gene Symbol
- sip1
- Assembly
- GCA_035043635.1
- Location
- JAWNMV010000890.1:2115152-2117906[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5 9e+03 -4.0 0.1 46 81 240 274 237 285 0.55 2 3 3.8e-96 2.3e-92 309.5 15.8 2 275 430 700 429 700 0.97 3 3 0.84 5.2e+03 -3.2 0.0 245 269 715 739 708 745 0.71
Sequence Information
- Coding Sequence
- ATGTCGGACCAAGAATACGAACGCTTTGAAATCACTGATTATGATCTGGATAATGAGTTCAACATAAACAGACCGCGCAGGCGCCACACTAAGCACCAGCAAATATATGGCATTTGGGCGGATGACAGCGACAATGAGAGTGAGGGCGAGAGCAGTGGACGCCGTGGACGCCGTGGCTTGGGCGGCGGCTCTGCTGGAAAGTCAAAAGATTACACAGCACCCGTGAGTTTCGTGGCCGGCGGAATTCAACAAGCCGGcaagaagcaaaagaaaaagcagAAGGAAGCAAACGCGGACAGCGATGAGACGGGCAGCAATGCGGATAGCAATGACAGCGACGAGACACGTCCTTCTTTTGGCCGCAAGCAACCGCAATTGATGGACAATAGCGATGGCAATAGCTCCGACAGCTCGGCGGGAGCGGAGGTGCGTCAGCATCAGTCGCGAAAGGCGGCTATGGCGTCTTCACGGCAGACTGCCGGACTCAGGCATAATTCCCACATTGCGAGCAATCGGAATGTAGGTGCCTGGGAGCAGCACACGCGTGGCATAGGCgccaagctgctgctgcagatggGCTACGAGCCCGGCAAGGGTCTAGGTAAAGATCTGCAGGGTATCTCGCAGCCGGTGCAGGCGCATGTGCGTAAGGGACGCGGCGCCATTGGCGCCTATGGGCCAGAGACAGCGCCTAGCGTGGGTGGACAGTCAAAGGCCCTGAAAAACGACGAAGGCCTCCAGGAGACCAAAGAGTCCAAGGAGCAACTCAACAAGTGGAAGAAAGGCGGCAACGAAGCTCGTGAAAAGTCCAGCAAGCGATACTACTACAAATCTGTGGAGGAAGTCATTGCCAAGGGCAAGAAATCTGATCATTTGCTGTCAGAAAAGCTGAGCAAGCGGCTCGGCAATGTCCCAGTAATTGATATGACTGGGCCTGAGCGTCGGGTGCTCAGCGGATATCACGCCCTGGCTCAGAACAAAATTACGCCAGAGGAGACGCTTTACGATGCGCAGGGAGTGGAAGAGAAGGGAGAGAAGGGCACGGCCGATTCGGTATTCAGCATGCCGGAACTGACCCACAATCTGCAGCTGCTGGTGAGCCAATGCGAGCAGGAGATCATTGCCATAGACAAGACAGAGCGCGAGTGTGCGGATCGTCAGGCGGCTTTGGAGCATGAGCAACACCAACTGCTGGAACTGGTGCAGTTGGAGCGCAATCATATGACCACGCTTCAAGCGACCCTCGCCCGCCTCGAACAGCTCAGCGAGAATCCGGAGTTGAGCCTGGCCCAGGCGGAGCAATTGTTTCTCGAGCTGCAGCACGACTATGCGGCGGAATTCAAAGAATTTGGATTGGCCGATCTGGCAGCGGGTGTAATAGCGCCGCTCCTGAAGCGGGAACTGGCCGATTGGCAGCCGTTGCAGGAGCCCACGCAGCCAGTGCAGCTGATCAAGCGATGGCGTGGCATATTGCAGCAGGATGGACCAGAGGTGTCAGAGCAACAGTCGCGAAATATATTCGATCCCTACTCCTCGCTCATCTGGGCTGGTGTGATGCCCTCGTTTAGGGCCTGCGCCGCTAGCTGGCAGCCAAAGGAGCATGCGTTAATGGCAGCTCTGCTGGACGCTTGGGCGCCTCTGTTGCCCACTTGGGTGCTTGACTCGGTGCTGGAGCAGCTTGTGCTGCCGCGACTAACTATTGGCGTCAGCGAATGGGATCCCCTAACCGATACTGTGCCCATACACAGCTGGATTCTGCCTTGGCATGCCATTCTGGGGTCCAAACTGGAGGAGACCATCTATCCGCAGATTCGTAGCAAGCTGGGCGCTGCACTGCAGGCCTGGTCACCACAGGATCGATCAGCACGCGCCATGCTGACGCCCTGGAAAATGGCCTTTGCCGAGGAGCAGCTAGTTCAGTTTTTGCTGCGTCACATCATACCCAAGTTGCAGGCGGTGCTCGCCGAATTCGTGATCAACCCGCTGCAACAGAATCTGGAGCAGTGGCATCAGGTGTGGGAGTGGCATGAGCTCATACCCGCCCATCACATGGCCCAGCTGCTGGACAAGCATTTCTTTCCACGCTGGATGCAGGTGCTCGTCATGTGGCTGAATCAGTCGCCGGACTATGCGGAAATCTCACGCTGGTATGCCGGCTGGAAGAGCATGTTCAGTGAGCCGATACTCCGGGAGCCTTGCATCAAGGAGCACTTGCGTCGCGCCCTCGACATGCTGCACCGAGCCACCGATGCGGTGCTGCAAACCACCACTGCACCGCCCCCACCCATGCCAACAGCACCCGCGCCTGTGCTCCTCACACCCGTCATGCTCGTAGACGTGGTGCCCCCTGCTCAGCTGGAATTCAAGGAGCTCGTCTCGCAGAAATGCGCCGAATTGGGCATCATATTTGCCCCACTGCCAGGTCGACGGGAACTGGGCAAACAGATCTACCGCGTGGGAAAGCTCTTCTGCTACATCGATCGCAATGTGTGCATGCTGAGCGACAGCAGCTTTACGAATTGGCAGCCAGTGGGACTTAATCAGTTGCTGGAACGGGCACAAACTGGGCTTCTTTAG
- Protein Sequence
- MSDQEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNESEGESSGRRGRRGLGGGSAGKSKDYTAPVSFVAGGIQQAGKKQKKKQKEANADSDETGSNADSNDSDETRPSFGRKQPQLMDNSDGNSSDSSAGAEVRQHQSRKAAMASSRQTAGLRHNSHIASNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAPSVGGQSKALKNDEGLQETKESKEQLNKWKKGGNEAREKSSKRYYYKSVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKITPEETLYDAQGVEEKGEKGTADSVFSMPELTHNLQLLVSQCEQEIIAIDKTERECADRQAALEHEQHQLLELVQLERNHMTTLQATLARLEQLSENPELSLAQAEQLFLELQHDYAAEFKEFGLADLAAGVIAPLLKRELADWQPLQEPTQPVQLIKRWRGILQQDGPEVSEQQSRNIFDPYSSLIWAGVMPSFRACAASWQPKEHALMAALLDAWAPLLPTWVLDSVLEQLVLPRLTIGVSEWDPLTDTVPIHSWILPWHAILGSKLEETIYPQIRSKLGAALQAWSPQDRSARAMLTPWKMAFAEEQLVQFLLRHIIPKLQAVLAEFVINPLQQNLEQWHQVWEWHELIPAHHMAQLLDKHFFPRWMQVLVMWLNQSPDYAEISRWYAGWKSMFSEPILREPCIKEHLRRALDMLHRATDAVLQTTTAPPPPMPTAPAPVLLTPVMLVDVVPPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDSSFTNWQPVGLNQLLERAQTGLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- iTF_00533792;
- 80% Identity
- -