Zbog002971.1
Basic Information
- Insect
- Zaprionus bogoriensis
- Gene Symbol
- sip1
- Assembly
- GCA_035046045.1
- Location
- JAWNOI010000036.1:2115809-2118533[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-98 2e-94 316.1 12.7 1 275 436 707 436 707 0.97 2 2 0.93 4.9e+03 -3.4 0.0 245 269 722 746 716 752 0.72
Sequence Information
- Coding Sequence
- ATGTCGGACAATGAATACGAACGCTTCGAGATCACAGACTATGACCTGGACAACGAGTTCAACATAAACAGACCGCGCCGGCGCCACACCAAGCACCAGCAGATCTACGGCATTTGGgccgacgacagcgacaatgACAGCGAGGGCGAGAGCAGCACTCGCCGCGGCCGCCGTGGTGGCCTGGGCGGCGGCTCCGCGAGCAAATCCAAAGACTACACGGCGCCCGTGAGCTTCGTAGCCGGCGGCATTCAGCAGGCCGGCAAGAAGCCCCCaaagaagcagctgcagcaggagggcGAGGCTGGCGGCAGCGGGGCGGAGGGCAGCGAGGCGGAGGACAGCGACGAGGCGCGTCCGTCGTTCGGGCgcaagcagccgcagctgttgGACAACAGCGATGCGAACAGCTCGGACAGCTCAGCGGAGCAGTTGGCGGAGGAGCCGTCGCGCAGGGACAGGCCGTtggcggggcgtggcaatgcGGGACTGCGGCATCATTCGCACATTGCGAGCAATCGCAATGTGGGCGCCTGGGAGCAGCATACGCGCGGCATCGgcgccaagctgctgctgcagatgggCTACGAGCCCGGCAAGGGTCTGGGCAAGGATCTGCAGGGCATCTCGCAGCCGGTGCAGGCGCATGTGCGCAAGGGACGCGGCGCCATCGGCGCCTACGGACCCGAGACGGCGGCCAGCGTGGGCGGCCAGGCGAAGGCGCCGAAGCTCGACGAGGATCTCAAGGAGGCCAAGGAGTTCAAGGAGCAGCTGAACAAGTGGAAGAAGAGCGGCAAAGAGACGGGCGAGAAGTCCGCTTCGGCGGCTGCCACGAAGCGCTACTACTACAAGTCCGTGGAGGAGGTGATAGCCAAGGGCAAGAAGTCGGATCACCTGCTCTCCGAGCAGCTGAGCCGGCGGCTCGGCAATGTGCCCGTGATCGATATGACGGGACCGGAGCGACGCGTGCTCAGCGGCTACCATGCGCTCGCCCAGAGCAAAATCGCGCCCGAGGAGACGCTCTACGAGACGCAGGCCACCGGCGAGGAGGGAGAGAAACCAGCGCCGCCGGCTTCGGTCTTCAGCATGCCGGAGCTGTCGCAcaacctgcagctgctggtgagCCAGTGCGAGCAGGAGATCATTGCCATCGACAAGGCGGAGCGCGAGTGCTCCGATCGCCAGGCGGCGCTGGAGTAcgagcaccagcagctgcaggagctggtGCAGCTGGAGCGGAATCACATGAGCACACTGCAGGGCGCACTGGCGCGCCTCGAGCAGCTGAGCGAGAATCCCGAACTGAGCCTGTCCCAGGCGGAGAAACTGTTCctggagctgcagcacgaCTTCGCCGCCGAGTACAAGGAGTTCGGACTGGCCGATCTGGCGGCGGGCGTCATAGCGCCGCTGCTGAAGCGCGAGCTGACCGACTGGCAGCCGCTGGAGCAGCCGACGAAGCCGCTGGCGCTGATCAAGCGCTGGCGCGGCATACTCCAGTCGGAGTCAGCAGCGGATGAGGGTCAGCAGTCGCGCAATGTCTTCGATCCGTACTCCTCGTTGATCTGGGCCGGCGTGATGCCCTCGTTCCGCACGTGTGCCGCCAGCTGGCAGCCCAAGCAGCATGCTCCAATGGCCGCGCTGCTGGAGGCCtgggcgccgctgctgcccacGTGGGTGCTGGACTCggtgctggagcagctggtgCTGCCGCGGCTCACGGTCGGCGTTAGCGAATGGGATCCGCTGACGGACACGGTGCCCATACACAGTTGGATACTGCCCTGGCACGGCATACTGGGCGCCAAGCTGGAGGAGTCCATCTATCCGCAGATACGCAAcaagctgggcgtggcactgcagGCCTGGTCGCCGCAGGATCGCTCGGCACGCGCCATGCTAACGCCCTGGCGCACGGCCTTCGATGAGGAGCAGCTGGTGCAGTTCCTGCTGCGGCACATCATACCCAAGCTGCAGGCGGTGCTGGGCGAGTTCATTATCAATCCGCTGCAGCAGAACCTCGAGCTGTGGCACCAGGTCTGGGAGTGGCACGAGCTCATACCCGCCCAGCACATGGCCCAGCTGCTGGACAAGCACTTCTTTCCGCGCTGGATGCAGGTGCTGGTCATGTGGCTCAACCAGTCGCCCGACTATGCGGAAATCTCGCGCTGGTACGCCGGCTGGAAGAGCATGTTCAGCGAGCCCATATTGCGGGAGCCCTGCGTCAAGGAGCATCTGCGTCGCGCACTCGACATGCTGCATCGCGCCACGGACGCAGTGCTGCAGcccgccgcagcagcgccgcctccGCCCATGccgccagcaccagctccgGGGCTGCTCGCGCCCGTCATGCTGGTCGATGTGGCGTCGCCCGCGCAGCTCGAGTTCAAGGAGCTCGTGTCGCAGAAGTGCGCCGAGCTGGGCATCATCTTTGTGCCGCTGCCAGGCAGACGCGAGCTGGGCAAGCAGATCTACCGCGTGGGCAAGCTCTTCTGCTTCATCGATCGTAACGTCTGCATGCTCAGCGACGGCAGCCTGAGCAACTGGCAGCCCGTCGCACTGAATCAGCTGCTCGAGCGCGCCCAGACCGGGCTGCTCTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNDSEGESSTRRGRRGGLGGGSASKSKDYTAPVSFVAGGIQQAGKKPPKKQLQQEGEAGGSGAEGSEAEDSDEARPSFGRKQPQLLDNSDANSSDSSAEQLAEEPSRRDRPLAGRGNAGLRHHSHIASNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVGGQAKAPKLDEDLKEAKEFKEQLNKWKKSGKETGEKSASAAATKRYYYKSVEEVIAKGKKSDHLLSEQLSRRLGNVPVIDMTGPERRVLSGYHALAQSKIAPEETLYETQATGEEGEKPAPPASVFSMPELSHNLQLLVSQCEQEIIAIDKAERECSDRQAALEYEHQQLQELVQLERNHMSTLQGALARLEQLSENPELSLSQAEKLFLELQHDFAAEYKEFGLADLAAGVIAPLLKRELTDWQPLEQPTKPLALIKRWRGILQSESAADEGQQSRNVFDPYSSLIWAGVMPSFRTCAASWQPKQHAPMAALLEAWAPLLPTWVLDSVLEQLVLPRLTVGVSEWDPLTDTVPIHSWILPWHGILGAKLEESIYPQIRNKLGVALQAWSPQDRSARAMLTPWRTAFDEEQLVQFLLRHIIPKLQAVLGEFIINPLQQNLELWHQVWEWHELIPAQHMAQLLDKHFFPRWMQVLVMWLNQSPDYAEISRWYAGWKSMFSEPILREPCVKEHLRRALDMLHRATDAVLQPAAAAPPPPMPPAPAPGLLAPVMLVDVASPAQLEFKELVSQKCAELGIIFVPLPGRRELGKQIYRVGKLFCFIDRNVCMLSDGSLSNWQPVALNQLLERAQTGLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476613;
- 90% Identity
- -
- 80% Identity
- -