Dmet000558.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila mettleri
Gene Symbol
sip1
Assembly
GCA_035047625.1
Location
JAWNPI010000018.1:5940693-5945020[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.1e-96 1.8e-92 309.8 14.5 2 275 424 694 423 694 0.98
2 2 0.62 2.7e+03 -2.4 0.0 163 190 712 738 705 749 0.45

Sequence Information

Coding Sequence
ATGTCCGACAATGAATACGAACGCTTTGAGATCACAGACTATGATTTGGACAATGAGTTTAATATAAACAGGCCACGCCGACGCCACACCAAGCATCAACAAATTTATGGCATTTGGGCGGATGATAGTGACAATGAAGGCGAAGGTGAAAGCGGTCGGCGCGGCAGACGTGGCTTGGGCGGCGGCTCAACCAGCAAGCCCAAGGACTACACTGCACCAGTTAATTTCGTAGCCGGCGGCATTCAGCAAGCGGGTAAAAAaccgaagaagaagcagctgcAAGATGGCAACGCAGACAGCGATGACCGGGACAGCGAAGCGATGGACAGTGACGACGCGCGACCCTCATTTGGACGCAAACAGCCACAGCTCATGGACCACAGCGATGCGAACAGCTCCGACAGCTCTGCGGAGCAACAGGAGCAGCCGCAACGCTCGACCATGTCAACGAATACCACAGCGGGACTGCGACACCATTCGCATATTGCGAGCAATAGGAATGTGGGTGCCTGGGAGCAGCATACGCGCGGCATCGGCGCCAAGCTTCTGCTGCAAATGGGCTACGAGCCAGGCAAGGGTCTGGGCAAGGATCTACAGGGCATCTCGCAACCGGTGCAGGCGCACGTGCGTAAGGGACGCGGCGCCATCGGTGCCTATGGCCCAGAGACGGCGGCTAGCATCGGCGGCCAGGCAAAGCCGCTGAAGATCGACGAAGATGTGAAAGAGGCCAAAGAGTTCAAGGAGCAACTCAACAAGTGGAAGAAGGGCGGCGGCGAAGCACGCGAAAAGAACAGCAAACGCTACTACTACAAGTCCGTGGAGGAGGTCATTGCCAAGGGCAAGAAGTCCGATCATCTGCTCTCCGAAAAGCTCAGCAAGCGGCTCGGAAATGTTCCCGTTATAGACATGACCGGACCGGAGCGTCGCGTGCTGAGCGGCTATCACGCCTTGGCGCAGAACAAAGTAACGCCCGAAGAGACGCTGTACGATGCCCAGCCTGGCGATGAGAATGCGGAGAAGGTCGCGCCTGGGTCCGTGTTCAGCATGCCGGAGCTGACGCACaacctgcagctgctggtgaGCCAGTGCGAGCAGGAGATCATAGCCATAGACAAGGAGGAGCGCGAATGCGCCGATCGGCAGGCGGCTCTGCTGCACGACCAGAAGCAGCTGCAGGAACTGGTGCAGCTCGAGCGCAATCACATAAGCACGCTGGAGGCGACCTTGCTGCGGCTCGAGCAGCTCAGCGAGAACCCAGAGCTGAGTCTCGCCCAAGCGGAGCGGCTGTTCCTCGAGCTGCAGCATGACTATGCGGCCGAGTACCAGGAATTCGGGCTGGCCGACCTGGCGGCGGGCGTCATTGCGCCGCTGCTGAAGCGCGAGCTCAACGATTGGCAGCCACTGGAGCAGCCCACGCAGCCGCTGCATCTGATCAAGCGCTGGCGCGGCATACTCCAGCGGGATGAGCTCGAGGTGTCGGAGCAGCAATCCCGCAACGTATTCGATCCATACTCCTCGCTCATCTGGGCAGGCGTAATGCCCTCATTCAGAGTCTGTGCCGCCAGCTGGCAGCCCAAGGAGCACGCGCCCATGGCGGCGCTGCTAGATGCCTGGGCGCCACTGCTGCCCACCTGGGTATTGGACTCGGTGCTGGAGCAGCTGGTGCTGCCGCGCCTGACGGCGGGCGTGCGCGATTGGGATCCCCTGACCGATACTGTGCCCATACACAGCTGGATTCTGCCCTGGCATGGCATACTCGGGGCCAAGCTGGAGGAGTCCATCTATCCGCAGATACGCAGCaagctgggcgtggcactgcAAGCGTGGTCGCCACAGGATCGCTCCGCGCGCGCCATGCTCACGCCCTGGCAGTCGGCCTTCCCCGAGGAGCAGCTGGTGCAGTTCCTGCTGCGCTACATCATACCCAAGCTGCAGGCGGTGCTCGCTGAGTTTGTCATTAGTCCGCTGCAGCAGAATCTGGAGCTGTGGCATCAGGTGTGGGAGTGGCACGAGCTCATACCCGCCCAGCATATGGCCCAGCTGCTGGACAAGCACTTCTTTCCGCGCTGGATGCAGGTCCTGGTCATGTGGCTCAATCAGTCGCCAGACTTTGGCGAAATCTCGCGCTGGTATGCCGGCTGGAAGAGCATGCTGAGCGAACCGATACTGCGCGAGCCCTGCATCAAGGAGCATCTGCGTCGCGCTCTCGACATGCTGCACCGCGCCACGGACGCCGTGCTGCAGCCCACATCTGCCCCGCCACCGCCAATGCCGCCAGCGCCACCTGCTCCCGTCTTGCTCACGCCTGTGATGCTCGTCGATGTGGTCGCCCCAGCTCAGCTGGAGTTCAAGGAGCTCGTCTCGCAGAAATGCGCCGAGCTCGGCATCATCTTTGCCCCACTGCCCGGGCGCCGAGAACTGGGCAAACAGatCTACCGCGTGGGAAAACTCTTCTGCTACATAGATCGCAACGTTTGCATGCTAAGCGACATCAGCTTTAATAACTGGCAGCCTGTGGCCTTGAATCAGCTACTGGAGCGCGCGCAGACGGGCATTATCTAG
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNEGEGESGRRGRRGLGGGSTSKPKDYTAPVNFVAGGIQQAGKKPKKKQLQDGNADSDDRDSEAMDSDDARPSFGRKQPQLMDHSDANSSDSSAEQQEQPQRSTMSTNTTAGLRHHSHIASNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGQAKPLKIDEDVKEAKEFKEQLNKWKKGGGEAREKNSKRYYYKSVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKVTPEETLYDAQPGDENAEKVAPGSVFSMPELTHNLQLLVSQCEQEIIAIDKEERECADRQAALLHDQKQLQELVQLERNHISTLEATLLRLEQLSENPELSLAQAERLFLELQHDYAAEYQEFGLADLAAGVIAPLLKRELNDWQPLEQPTQPLHLIKRWRGILQRDELEVSEQQSRNVFDPYSSLIWAGVMPSFRVCAASWQPKEHAPMAALLDAWAPLLPTWVLDSVLEQLVLPRLTAGVRDWDPLTDTVPIHSWILPWHGILGAKLEESIYPQIRSKLGVALQAWSPQDRSARAMLTPWQSAFPEEQLVQFLLRYIIPKLQAVLAEFVISPLQQNLELWHQVWEWHELIPAQHMAQLLDKHFFPRWMQVLVMWLNQSPDFGEISRWYAGWKSMLSEPILREPCIKEHLRRALDMLHRATDAVLQPTSAPPPPMPPAPPAPVLLTPVMLVDVVAPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDISFNNWQPVALNQLLERAQTGII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476613;
90% Identity
iTF_00545228;
80% Identity
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