Efoe031638.1
Basic Information
- Insect
- Epiblema foenella
- Gene Symbol
- retn
- Assembly
- GCA_963556455.1
- Location
- OY747114.1:11496396-11502916[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-20 2.2e-16 61.2 0.0 15 89 4 76 1 76 0.94 2 2 5.4 2.5e+04 -3.1 0.0 25 38 203 216 167 217 0.70
Sequence Information
- Coding Sequence
- ATGGTGGACAGTATCGGGACACCAATAAACCGGCTGCCGATAATGGCGAAGTCGGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATAGCGCGCGGCGGCTTGGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTGCGGCTGCCGTCGTCCATCACTTCGGCCGCCTTCACTTTGCGCACACAATACATGAAGTACCTATATGACTACGAGTGTGAAAAGAAGAACTTATCAACCCGGAGCGAGCTGGACGCGGCCATCGAAGGCAACAAGCGCGAGGGCCGCCGCGCCTCCGGCCAGTACGACGCGCAAGCTGCGTTGGCAATGCCCCCCCTGAACCGGGTGCCGGCGTCGCTCGCGCAACTCTCGCAGCACATGCAGCCGCTCTCGCTGTCGCTTGGCGGCGTCCCGCGCCTGCCCCCGCTGCCGCCGCACGCGCCGCACATATCCCAGCACGACATAGAGTACAGAGTGCGCGAGTACATGAAGATGATACAGACGCAGAGGGAGCTGATGAGGAATGGTTCTGAATCGCCCCCTGGATCGGGCCCTACCCCGATGATGTCGCCCCGGGACGCGGCGGCGCTCAGCGCCATCGACGTGTCGCGGCTGACGCTGTGGTCTCtctacaacaacaacaacaacagccCGCAGCCCGACCTCGAGCCCCAACGCGAGGCCCTGAACCTGAGCGAGAGTCCGAACTCTTCCCTGACGGGGATCAAGCGCGAGGCGTGCcggtcgccgccgccgcccgccaaGCGGCGCACGCCGCGCCCGCCCTCGCCGCGCGCGCcctcgccgccgcgcgccgccagCCTGCCGCCGCAGGTCAACGGGAACGGAGTCAATGGCGCGGCCTTCAAGATCACAACCAGAGGAGACGCCAGCACGGGAGACCAGCAGCTAGTCGTCTCGATCGAGCTCAACGGCGTCACGTACGAGGGCGTCCTCTTTCCCTCACAGAACGCCAGCGGACAGAACGGCCATAGGCAAATGGTCTCTTAA
- Protein Sequence
- MVDSIGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPGSGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSLTGIKREACRSPPPPAKRRTPRPPSPRAPSPPRAASLPPQVNGNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNASGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_00289409; iTF_01133505; iTF_00149160; iTF_00148268; iTF_00680303; iTF_00772661; iTF_00026626; iTF_00835333; iTF_00837251; iTF_00834409; iTF_00836302; iTF_00355910; iTF_00354872; iTF_01072231; iTF_01401064; iTF_00871081; iTF_00008683; iTF_00410061; iTF_00409071; iTF_00411190; iTF_00412305; iTF_00155094; iTF_00156037; iTF_00462155; iTF_00325153; iTF_00341998; iTF_01135535; iTF_01134566; iTF_01245719; iTF_00009785; iTF_00660091; iTF_00655877; iTF_01463945; iTF_00659248; iTF_00656925; iTF_01403228; iTF_01336610; iTF_00844101; iTF_00275029; iTF_00021119; iTF_01463040;
- 80% Identity
- -