Axyl008527.1
Basic Information
- Insect
- Archips xylosteana
- Gene Symbol
- retn
- Assembly
- GCA_947563465.1
- Location
- OX387359.1:13248437-13259066[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-21 1.8e-17 64.2 0.1 13 89 5 79 2 79 0.95 2 2 5.7 1.8e+04 -3.0 0.0 25 38 207 220 170 221 0.65
Sequence Information
- Coding Sequence
- ATGTACGTTCAGCTGCAGAAAAAAGGCACTCCTATAAACCGACTGCCGATTATGGCTAAGTCGGTGCTAGATCTGTACGAGCTCTACAACCTGGTGATAGCCCGCGGCGGGCTTGTCGAGGTCATCAACAAAAAGCTATGGCAAGAGATCATCAAGGGGCTGCGGCTGCCGTCCTCTATAACATCCGCTGCTTTCACTCTACGCACACAATACATGAAGTACCTGTACGATTACGAGTGCGAGAAGAAGAATCTGTCGACCCGCAGCGAATTGGATGCCGCCATCGAAGGCAACAAGCGCGAGGGCCGCCGTGCCTCCGGGCAGTACGACGCTCAAGCCGCTCTTGCCATGCCCCCCCTGAACCGCATGCCGGCGTCGCTGGCGCAGCTGTCTCAGCACATGCAGCCTCTCTCGCTCTCGCTGGGCGGCGGCGTGCCGCGTTTGCCGCCGCTGCCGCCGCACGCGCCGCATATTTCGCAGCATGACATCGAGTATAGAGTGCGGGAATACATGAAGATGATACAGCAGCAACGGGAGTTGATGCGTAATGGATCGGAGTCCCCGCCGGGGTCAGGGCCAGCGCCGATGATGTCGCCGCGCGACGCTGCCGCCCTCAGTGCCATCGACGTCTCGCGGCTCACGCTCTGGTCGCTCTACAACAACAACAACAACAGCCCGCAACCGGATCTGGAACCGCAACGCGAGGCGCTGAATCTGAGCGAAAGCCCCAACTCTTCGTTGGGTGCCGGCGGTATAAAGCGCGAGGCTTGCCGTTCGCCCCCTCCCCCCGCCAAGCGCCGTAACTCGCGCCCCGTCTCCCCTCGCGCGCCTTCACCGCGCCCCGCCAGTAACCCTGTACCACCACAACATAACGGTAACGGAGTAAACGGGGCAGCCTTTAAAATTACCACTAGAGGAGATGCGAGCACAGGAGACCAACAGTTAGCCGTATCTATCGAGCTGAACGGCGTCACATACGAAGGCGTCCTATTCCCTTCACAGAACGCCAGCGGGCAGAATGGACACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MYVQLQKKGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRMPASLAQLSQHMQPLSLSLGGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSLGAGGIKREACRSPPPPAKRRNSRPVSPRAPSPRPASNPVPPQHNGNGVNGAAFKITTRGDASTGDQQLAVSIELNGVTYEGVLFPSQNASGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00155094;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -