Hsal034564.2
Basic Information
- Insect
- Hedya salicella
- Gene Symbol
- retn
- Assembly
- GCA_905404275.1
- Location
- FR990112.1:10003238-10011871[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-20 3.7e-16 60.7 0.0 17 89 6 76 1 76 0.94 2 2 6.2 2.9e+04 -3.1 0.0 25 38 204 217 169 218 0.71
Sequence Information
- Coding Sequence
- ATGACAGCTACTCCTGGGACACCAATAAACCGGCTGCCTATCATGGCGAAGTCAGTGCTGGATCTGTACGAGCTGTACAACCTAGTAATTGCGCGAGGCGGCCTCGTCGAGGTCATCAATAAGAAGTTGTGGCAGGAGATCATCAAGGGACTGCGGCTACCTTCGTCCATCACCTCCGCAGCCTTCACTCTGCGCACACAATACATGAAGTACCTGTACGACTACGAGTGCGAGAAGAAGAACCTGTCGACCCGCAGCGAGCTGGATGCGGCGATCGAGGGCAACAAGCGGGAGGGTCGCCGCGCCTCCGGCCAATACGACGCGCAGGCTGCCCTGGCAATGCCCCCCCTCAACCGGGTGCCGGCGTCGCTCGCGCAGCTCTCCCAGCACATGCAGCCCCTCTCCCTCTCGCTGGGAGGGGGCGTGCCGCGTctgccgccgctgccgccgcacgcgccgcataTATCGCAGCACGACATCGAGTACCGAGTGCGGGAGTACATGAAGATGATACAGACGCAGCGGGAGCTCATGAGGAATGGTTCCGAGTCACCCCCCGGTTCCGGCCCCACCCCGATGATGTCGCCACGAGACGCGGCCGCGCTCAGCGCCATCGACGTCTCCCGGCTGACGCTTTGGTCCCTCtacaacaacaataacaacagccCCCAGCCCGACCTCGAACCGCAACGCGAGGCACTGAACCTGAGCGAGAGCCCCAACTCGTCGCTGACGGGCATCAAGCGCGAGGCGTGtcgctcgccgccgccgcccgccaagcgtcgcacgccgcgcccgccgtcgCCGCGCGCGCCCTCGCCGCCGCGCGCCACCGGCCTGCCCGCGCCGCTCCATGCCAACGGCGTCAACGGGGCCGCCTTCAAGATTACCACTAGAGgaGACGCCAGCACGGGAGACCAGCAGCTAGTCGTCTCGATCGAGCTCAACGGCGTCACGTACGAGGGCGTCCTCTTCCCCTCACAGAACGCGAGCGGTCAGAACGGCCATAATAGGCAAATGGTGTCCTAA
- Protein Sequence
- MTATPGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPGSGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSLTGIKREACRSPPPPAKRRTPRPPSPRAPSPPRATGLPAPLHANGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNASGQNGHNRQMVS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -