Ibis006721.2
Basic Information
- Insect
- Idaea biselata
- Gene Symbol
- retn
- Assembly
- GCA_958496205.1
- Location
- OY292395.1:21352133-21362979[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.8e-20 2.6e-16 60.5 0.0 16 89 44 115 34 115 0.91 2 2 4.1 1.2e+04 -2.6 0.0 25 37 247 259 207 261 0.50
Sequence Information
- Coding Sequence
- ATGAATCGAGTGGGGCGGCGCAATCAAAAGCATATCAGACCAATGGGAGTCCGGCCTCTCTCCATCGCAGTCTCTGATTGGCCCGTCGCAGGGTTGAGGGGCTTGCAGGGCCTTGATACCACTATTGATAAGCGTACGCCGATAAATCGACTGCCGATAATGGCCAAGTCTGTGCTAGATCTGTACGAGCTTTACAACCTGGTGATAGCCCGCGGCGGCCTCGTCGAGGTGATCAACAAGAAGTTATGGCAAGAGATCATCAAAGGGCTAAGGTTGCCGTCGTCGATCACGTCAGCAGCGTTTACTTTACGGACGCAATATATGAAATACTTGTATGACTACGAGTGCGAGAAGAAGAACCTATCGACGCGCAGCGAACTGGACGCGGCTATAGAAGGGAACAAGCGGGAAGGGAGGCGAGCTTCAGGACAATATGACGCGCAAGCTGCACTAGCTATGCCGCCCCTGAACCGCGTGCCAGCTTCCTTAGCCCAGCTCTCTCAACACATGCAGCCTCTATCGCTCTCCCTCGGTGGGGGGGTGGCCGGTGTGCCCAGACTGCCTCCACTGCCACCACACGCGCCGCACATCTCACAGCACGAGATAGAGTACAGGGTTCGGGAGTACATGAAGATGATACAGCAGCAGCGGGAGTTGATGAGGAATGGTTCAGAATCTCCCCCATCAGTGAACGGGCCCACTCCAATGATGTCACCTCGGGACGCAGCAGCGCTCAGTGCCATCGACGTCTCCCGCCTCACACTCTGGTCActctacaacaacaacaataacaacagcccgcagccagacttggagCCTCAACGGGAAGCTCTAAACCTCAGCGAGAGTCCAAACTCGACGCTTAGTGGTGGTAAGCGCGAGGCCTGCCGATCGCCTCCTCCTCCAGCCAAGCGACGCACCCCGCGCCCCCCTTCCCCCCGGCTACCCTCCCCCCCGCGGCAAGCTTGCGCACCACCACCGCAGGTCAATGGAAACGGAGTCAATGGAGCAGCTTTCAAAATTACCACCAGAGGTGATGCATCAACAGGCGATCAACAGCTTGTCGTATCAATAGAATTAAATGGAGTCACATACGAAGGCGTTCTTTTTCCCTCACAAAACTGCAACGGACAAAATAATCACAGGCAAATGGTATCTTAA
- Protein Sequence
- MNRVGRRNQKHIRPMGVRPLSIAVSDWPVAGLRGLQGLDTTIDKRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHISQHEIEYRVREYMKMIQQQRELMRNGSESPPSVNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSTLSGGKREACRSPPPPAKRRTPRPPSPRLPSPPRQACAPPPQVNGNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNCNGQNNHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -