Idim023805.2
Basic Information
- Insect
- Idaea dimidiata
- Gene Symbol
- retn
- Assembly
- GCA_949358125.1
- Location
- OX442341.1:9950108-9958408[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-20 3e-16 60.3 0.0 17 89 16 86 11 86 0.95 2 2 3.5 1.2e+04 -2.5 0.0 25 38 218 231 178 233 0.56
Sequence Information
- Coding Sequence
- ATGATTAACTGCAGACAGGAAGACGGATTGACGAATAGTCCTTTAGGCACGCCAATAAACCGACTGCCGATAATGGCTAAGTCTGTGCTAGATCTGTACGAGCTTTACAACCTGGTGATCGCTCGAGGCGGGCTCGTCGAGGTGATCAACAAGAAGTTATGGCAAGAGATCATCAAAGGGCTTAGGTTGCCGTCGTCGATCACGTCAGCTGCGTTTACTTTACGGACACAATATATGAAATACTTGTATGACTACGAATGTGAGAAGAAGAATCTTTCGACGCGCAGCGAACTGGATGCGGCTATAGAGGGAAACAAGCGGGAAGGGAGGCGAGCTTCGGGACAATATGACGCTCAAGCTGCACTAGCTATGCCGCCCCTGAACCGCGTGCCAGCCTCCTTAGCCCAGCTGTCCCAACATATGCAGCCTCTATCGCTCTCCCTGGGTGGGGGGGTGGCCGGTGTGCCGAGACTCCCACCACTGCCACCGCACGCGCCTCACATCTCACAGCACGAGATAGAGTACAGGGTTCGGGAGTACATGAAGATGATACAGCAGCAACGGGAGTTGATGAGGAATGGTTCAGAATCTCCGCCATCAGCCAACGGTCCCACTCCCATGATGTCGCCGCGAGACGCAGCAGCTCTCAGCGCGATCGACGTCTCCCGCCTCACACTCTGGTCACtctacaacaacaacaacaacaacagcccGCAGCCAGATTTGGAGCCTCAACGGGAAGCTCTAAATCTCAGCGAGAGTCCAAACTCAACACTTAGCGGTGGTAAGCGCGAGGCTTGCCGCTCGCCCCCCCCTCCCGCCAAGCGTCGCACCCCGCGTCCCCCCTCGCCGCGGCTGCCTTCCCCTCCGCGGCAAGCGTGCGTACCCCCACCGCAGGTCAACGGCAACGGAGTCAATGGAGCAGCTTTCAAAATTACCACCAGAGGTGATGCATCAACAGGCGATCAACAACTTGTCGTATCAATAGAATTAAACGGAGTCACATACGAAGGCGTTCTCTTTCCCTCACAAAACGGCAACGGACAAAATAATCACAGGCAAATGGTATCTTAA
- Protein Sequence
- MINCRQEDGLTNSPLGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHISQHEIEYRVREYMKMIQQQRELMRNGSESPPSANGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSTLSGGKREACRSPPPPAKRRTPRPPSPRLPSPPRQACVPPPQVNGNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNNHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -