Camp015842.1
Basic Information
- Insect
- Cydia amplana
- Gene Symbol
- retn
- Assembly
- GCA_948474715.1
- Location
- OX419670.1:9410193-9418285[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-20 1.6e-16 60.9 0.0 15 89 25 97 20 97 0.94 2 2 6.5 2.4e+04 -3.7 0.0 25 38 224 237 208 238 0.74
Sequence Information
- Coding Sequence
- ATGGATACGAAGTCGCGCATCATAAAAGCGCAGTCTCAAAGCAACAAAGTCGGCAGTAAAGGTGTTAACGCGAGCGTGGGCACACCGATAAACCGGCTGCCGATAATGGCGAAGTCGGTGCTGGATCTGTACGAGCTGTACAACCTGGTGATCGCGCGCGGCGGGCTCGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCGTCTTCCATCACCTCCGCTGCCTTCACCCTGCGCACGCAATACATGAAGTACCTATATGACTACGAGTGCGAAAAGAAGAATTTGTCGACTCGCAGCGAGCTGGACGCGGCCATCGAGGGAAACAAGCGCGAGGGACGGCGGGCGTCCGGCCAGTACGACGCGCAAGCCGCGCTGGCAATGCCCCCGCTGAACCGGGTGCCCGCGTCGCTGGCGCAACTCTCGCAGCACATGCAGCCGCTCTCGCTGTCGCTGGGCGGCGTGCCGCGCCTGCCGCCGCTGCCGCCGCACGCGCCGCACATATCCCAGCACGACATCGAGTACCGAGTGCGCGAGTACATGAAGATGATACAGACACAGAGGGAGTTGATGAGGAATGGTTCAGAATCGCCCCCCGGCTCCGGGCCTACCCCCATGATGTCGCCGCGGGACGCCGCCGCGCTGAGCGCCATCGACGTGTCGCGGCTCACGCTGTGGTCGCTCTACAACAACAACAACAACAGCCCGCAGCCCGACCTCGAGCCACAACGCGAGGCCCTGAACCTGAGCGAGAGCCCCAACTCGTCGCTGACGGGCATCAAGCGCGAGGCGTGCCGCTCGCCGCCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCCCCTCCCCCGCCCTCCGCGCGCCCTCCCCGCCCCGCCCCAGCAGCCTGCCCCCGCAGGTCAACGGGAACGGCGTCAACGGCGCGGCCTTCAAGATTACTACCAGAGGAGATGCCAGCACGGGAGACCAGCAACTAGTCGTCTCCATCGAGCTGAACGGTGTCACGTACGAAGGCGTCCTCTTCCCCTCACAAACCGCCAGCGGACAAAACGGACACAGGCAAATGGTCTCTTAG
- Protein Sequence
- MDTKSRIIKAQSQSNKVGSKGVNASVGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPGSGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSLTGIKREACRSPPPPAKRRTPRPPSPALRAPSPPRPSSLPPQVNGNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQTASGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00155094;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -