Nudd039457.2
Basic Information
- Insect
- Notocelia uddmanniana
- Gene Symbol
- retn
- Assembly
- GCA_905163555.1
- Location
- LR991069.1:14744013-14750232[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-19 6.8e-16 60.1 0.0 17 89 10 80 8 80 0.95 2 2 8.1 3.6e+04 -3.2 0.0 25 38 207 220 172 221 0.71
Sequence Information
- Coding Sequence
- ATGGGATATTCATCAGAGTGGCTATTAGGAACACCAATAAACCGGCTGCCGATAATGGCGAAGTCGGTGCTGGACCTGTACGAATTGTACAACCTGGTGATCGCGCGCGGCGGCCTGGTCGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCGTCGTCCATCACTTCGGCCGCCTTCACTTTGCGAACACAATACATGAAGTACCTATACGACTACGAGTGTGAAAAGAAGAACTTGTCCACCCGGAGCGAGCTGGACGCGGCCATCGAGGGCAACAAGCGCGAGGGCCGCCGCGCCTCCGGCCAGTACGACGCGCAAGCTGCGCTGGCAATGCCCCCCCTGAACCGGGTGCCGGCGTCGCTCGCGCAGCTCTCGCAGCACATGCAGCCTCTCTCGCTCTCGCTGGGCGGGGTCCCGCGTCTACCGCCGCTGCCGCCGCACGCGCCGCACATATCGCAACACGACATAGAGTACAGAGTGCGCGAGTATATGAAGATGATACAGACGCAGAGGGAGCTGATGAGGAATGgttctgagtCGCCTCCTGGCTCCGGCCCGACCCCCATGATGTCGCCGCGGGACGCAGCCGCGCTCAGCGCCATCGACGTGTCGCGGCTGACGCTGTGGTCGCtctacaacaacaacaacaacagccCGCAGCCCGACCTCGAGCCACAACGCGAGGCCCTGAACCTGAGCGAGAGCCCGAACTCTTCGCTGACGGGGATCAAGCGCGAGGCGTGCcggtcgccgccgccgcccgccaaGCGCCGCACCCCGCGCCCGCCCTCCCCGCGCGCGCCCTCCCCGCCGCGCCCCGCCGGCCTGCCGCCGCAGGTCAACGGGAACGGCGTCAATGGGGCGGCCTTCAAGATCACTACCAGAGGAGACGCCAGCACGGGAGACCAGCAGCTAGTCGTCTCCATCGAACTCAACGGCGTCACGTACGAGGGCGTCCTCTTCCCCTCACAGAACGCCGGCGGACAGAACGGCCATAATAGGCAAATGGTCTCTTAA
- Protein Sequence
- MGYSSEWLLGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPGSGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSLTGIKREACRSPPPPAKRRTPRPPSPRAPSPPRPAGLPPQVNGNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNAGGQNGHNRQMVS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -