Cfug024513.1
Basic Information
- Insect
- Carpatolechia fugitivella
- Gene Symbol
- retn
- Assembly
- GCA_951230895.1
- Location
- OX579664.1:9021097-9027177[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-20 1.2e-16 61.8 0.0 9 89 20 96 14 96 0.91 2 2 5.9 1.6e+04 -2.7 0.0 25 38 228 241 189 242 0.57
Sequence Information
- Coding Sequence
- ATGCGCACGCGCAGCGTCCCTACATCAAAGGTGCTGGCTATCAACCTTTACTTAGACTTAGTACAGGTTTGTGCTGGCACGCCGATAAACCGACTGCCGATAATGGCCAAGTCCGTATTGGACTTGTACGAGTTGTACAACCTGGTGATCGCACGTGGAGGGCTGGTGGAAGTCATCAACAAGAAGCTGTGGCAAGAGATCATCAAGGGACTGAGACTGCCGTCGTCTATCACATCAGCTGCTTTCACGTTGCGGACTCAGTACATGAAATACCTGTATGACTATGAATGTGAGAAGAAGAACTTGTCAACCCGCAGCGAGTTAGACGCAGCCATTGAGGGTAACAAGCGCGAGGGTCGGAGAGCATCTGGACAGTACGACGCGCAGGCGGCGTTAGCCATGCCACCTCTGAACAGAGTGCCAGCAAGTCTGGCTCAGTTGTCTCAACACATGCAGCCATTATCCCTGTCGCTGGGCGGCGGAGTGGCTGGTGTTCCACGTCTGCCTCCCCTGCCTCCTCACGCACCGCACCTCTCCCAACATGACCTGGAGTACCGCGTCCGAGAGTACATGAAGATGATCCAGCAACAACGCGAGCTAATGAGAAATGGCTCGGAATCTCCACCCAGTGCCAACGGCCCTACTCCGATGATGTCTCCTCGTGACGCAGCTGCTCTCAGTGCCATCGACGTCTCCCGGCTCACGCTCTGGTCACTctacaacaacaataacaacagccCTCAACCGGATTTGGAACCTCAACGGGAGGCTTTAAACCTCAGTGAGAGTCCAAACTCGAGTGGGAGCGTGAAGCGAGAGGCTTGCCGGTCTCCCCCTCCTCCCGCGAAGCGCCGCACCCCGCGGCCCGCGTCCCCCCGCGCGGCTTCACCCCCGCGCCCCGCTTCACTCCCCTCACATACCCAGAGGGACACGCAAGTCAATGGTGGTAGCAATGGAGTGAATGGAGCCGCGTTCAAGATTACTACTAGGGGAGACGCGACCACAGGCGACCAGCAGCTGGTAGTCTCAATAGAACTCAACGGGGTCACTTATGAAGGCGTCCTCTTCCCCTCAAACGCAAACGGCCAGAACGGACACAGACAAATGGTCTCCTAA
- Protein Sequence
- MRTRSVPTSKVLAINLYLDLVQVCAGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHLSQHDLEYRVREYMKMIQQQRELMRNGSESPPSANGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSGSVKREACRSPPPPAKRRTPRPASPRAASPPRPASLPSHTQRDTQVNGGSNGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSNANGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00150269;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -