Klyc007490.1
Basic Information
- Insect
- Keiferia lycopersicella
- Gene Symbol
- retn
- Assembly
- GCA_029255805.1
- Location
- JARACZ010000005.1:7384127-7394422[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.1e-20 2.4e-16 60.8 0.0 13 89 29 103 24 103 0.94 2 2 4.6 1.6e+04 -2.7 0.0 25 38 235 248 196 249 0.57
Sequence Information
- Coding Sequence
- ATGTTGCACCGGATAGGGCGGCCGGGTTTTAATGTCTCTCCGACGGAATTACGCTGGATTGTTCTCAACTTTACTGCTCCCCTCATGATTGATCGTTGCACGCCGATAAACCGACTGCCGATTATGGCCAAGTCCGTGTTAGACCTGTATGAGCTGTACAACCTGGTGATCGCTCGGGGCGGACTGGTGGAGGTCATCAACAAGAAGCTCTGGCAGGAGATCATCAAGGGTCTGAGGCTGCCATCGTCTATCACCTCGGCGGCGTTCACACTTAGGACACAGTACATGAAGTACTTGTACGACTATGAGTGTGAGAAGAAGAACCTATCAACTCGCAGCGAACTGGACGCCGCCATTGAGGGCAACAAGCGCGAGGGACGCCGTGCCTCAGGCCAGTACGACGCGCAAGCAGCGTTAGCCATGCCGCCATTGAACCGAGTGCCAGCGTCTCTGGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCTCTTTCCCTCGGAGGGGGGGTTGCGGGGGTGCCGCGtctgccgccgctgccgcctcACGCGCCGCACCTGTCACAGCATGACTTGGAGTACCGCGTCCGGGAGTACATGAAGATGATCCAGCAGCAACGCGAGCTGATGAGGAATGGCTCAGAATCCCCACCCAGTGCCAACGGCCCGACTCCAATGATGTCTCCCCGCGACGCAGCTGCCCTCAGCGCCATCGACGTGTCGCGTCTCACGCTCTGGTCTctctacaacaacaacaacaacagtcCCCAACCAGACCTGGAGCCTCAGCGGGAGGCACTGAACCTGAGCGAGAGCCCAAACTCTAGCGTGAGCGTGAAGCGCGAGGCTTGCCGCTCTCCCCCCCCTCCCGCGAAGCGACGCACCCCGCGCCCTGCGTCCCCCCGCGCCGCctcccccccgcgccccgccTCACTCCCTGCGCACACGCAGCCACAGATCAACGGCGGCAACAGCAATGGCGTCAATGGAGCTGCGTTCAAGATCACTACTAGAGGAGACGCGAGCACAGGCGACCAGCAACTTGTGGTGTCAATAGAACTCAACGGCGTCACATACGAGGGCGTTTTGTTCCCCTCCAACGCGAGTGGACAAAACGGACACAGGCAAATGGTGTCCTAA
- Protein Sequence
- MLHRIGRPGFNVSPTELRWIVLNFTAPLMIDRCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHLSQHDLEYRVREYMKMIQQQRELMRNGSESPPSANGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSVSVKREACRSPPPPAKRRTPRPASPRAASPPRPASLPAHTQPQINGGNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSNASGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00150269;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -