Acap015109.1
Basic Information
- Insect
- Apotomis capreana
- Gene Symbol
- retn
- Assembly
- GCA_947623375.1
- Location
- OX392515.1:12815452-12821691[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-20 2.9e-16 60.6 0.0 17 89 17 87 13 87 0.95 2 2 8.8 3.3e+04 -3.6 0.0 25 38 215 228 198 229 0.74
Sequence Information
- Coding Sequence
- ATGCTCGCTCATCAAACGATCGATGCCGGGGCGACAGACGATGTCGACGGCACACCGATAAACCGGCTGCCTATAATGGCGAAGTCAGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCGCGGGGAGGCCTGGTCGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTTCGGCTGCCTTCTTCCATAACCTCCGCTGCTTTCACTCTGCGCACACAATACATGAAGTACCTGTATGACTACGAGTGCGAGAAGAAGAACCTGTCGACTCGTAGCGAGTTGGACGCCGCCATTGAAGGCAACAAGCGCGAGGGCCGCCGCGCCTCCGGCCAGTACGACGCGCAGGCTGCTTTGGCAATGCCCCCCCTCAACCGGGTGCCGGCGTCGCTCGCGCAGTTGTCCCAGCACATGCAGCCCCTCTCGCTCTCACTCGGAGGTGGAGTGCCTCGTCTACCGCCACTGCCGCCACATGCACCACATCTCTCACAGCATGATATCGAGTATCGTGTCCGGGAATATATGAAGATGATTCAGACGCAGCGGGAGCTGATGAGGAATGGTTCGGAATCGCCTCCTGGCTCCGGGCCTACTCCGATGATGTCGCCCCGAGATGCCGCCGCTCTCAGCGCTATCGACGTCTCCCGGCTGACGTTGTGGTCGCTTTACAACAACAACAATAACAGCCCCCAGCCCGACCTCGAGCCACAACGCGAGGCCCTGAACCTGAGCGAGAGCCCCAACTCGTCCCTAACCGGCATCAAGCGTGAAGCGTGCCGCTCCCCCCCGCCGCCGGCCAAGCGCCGCACCCCGCGGCCGCCGTCGCCGCGCGCGCCCTCGCCGCCGCGCGCCGGCGCGCTGCCCGACCAGCTCAACGGGAACGGGGTCAACGGGGCGGCTTTCAAGATTACTACCAGAGGAGACGCCAGCACGGGAGACCAACAGCTGGTCGTCTCGATCGAGCTCAACGGCGTCACGTACGAAGGCGTACTCTTTCCCTCACAGAACGCCAGCGGTCAAAACGGCCATAGGCAAATGGTGTCTTAA
- Protein Sequence
- MLAHQTIDAGATDDVDGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGGVPRLPPLPPHAPHLSQHDIEYRVREYMKMIQTQRELMRNGSESPPGSGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSLTGIKREACRSPPPPAKRRTPRPPSPRAPSPPRAGALPDQLNGNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNASGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_00654018;
- 80% Identity
- iTF_00149160;