Ebru045353.1
Basic Information
- Insect
- Epinotia brunnichana
- Gene Symbol
- retn
- Assembly
- GCA_963854355.1
- Location
- OY977950.1:13390122-13398579[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-19 1.6e-15 59.2 0.0 17 89 40 110 33 110 0.93 2 2 9.9 7.4e+04 -3.8 0.0 25 38 237 250 222 251 0.74
Sequence Information
- Coding Sequence
- ATGGTACTCATGTACACCAAGTGTTGTTTCCCGGAGCATCTGCTAGCACTTCCGGATGATGTATGCTACCACGGCGATGCGCCCGACCATCCGTCACTTCATTACGGCCCGCAGATTAGAACACCAATAAACCGGCTGCCGATAATGGCGAAGTCGGTGCTGGACCTGTACGAGCTTTACAACCTGGTGATCGCGCGCGGCGGGCTCGTGGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCGTCCTCCATCACGTCAGCGGCCTTCACTCTGCGCACACAATACATGAAGTACCTATACGACTACGAGTGTGAAAAGAAGAACCTATCAACCCGGAACGAGCTGGACGCGGCGATCGAGGGCAACAAGCGCGAGGGCCGACGAGCTTCCGGCCAGTACGACGCGCAGGCTGCGCTGGCAATGCCCCCCCTGAGCCGGGTGCCGGCCTCGCTCGCGCAGCTCTCACAGCACATGCAGCCCCTCTCGCTCTCTCTCGGCGGGGTCCCGCGCCTGCCACCGCTACCGCCGCATGCGCCGCACATATCGCAGCACGATATAGAATACAGGGTGCGCGAATATATGAAGATGATTCAGACACAGAGGGAGCTGATGAGGAATGGTTCCGAATCGCCCCCCGGCTCCGGGCCGACCCCGATGATGTCTCCGCGGGACGCCGCCGCGCTCAGCGCCATCGACGTGTCGCGGCTCACGCTCTGGTCCCtctacaacaacaacaacaacagcaGCCCGCAGCCCGACCTCGAGCCACAACGCGAGGCCCTGAACCTGAGCGAGAGCCCCAACTCGTCGCTGTCGGGCATCAAGCGCGAGGCGTGCCGCTCCCCCCCGCCGCCCGCCAAGCGCCGCACCCCGCGCCCGCCCTCCCCGCTCGCGCCcgagccgccgccgccgcgcggcCTGCCGCAGATCAACGGGCACGGCGTCAACGGGGCGGCCTTCAAGATCACTACTAGAGGCGACGCCAGTACGGGGGACCAGCAGCTAGTCGTCTCCATCGAGCTGAACGGCGTCACGTACGAGGGCGTCCTCTTCCCCTCACAGAACGCGGGCGGACAGAATGGCCACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MVLMYTKCCFPEHLLALPDDVCYHGDAPDHPSLHYGPQIRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRNELDAAIEGNKREGRRASGQYDAQAALAMPPLSRVPASLAQLSQHMQPLSLSLGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPGSGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSSPQPDLEPQREALNLSESPNSSLSGIKREACRSPPPPAKRRTPRPPSPLAPEPPPPRGLPQINGHGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNAGGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00155094;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -