Lstr030596.1
Basic Information
- Insect
- Lathronympha strigana
- Gene Symbol
- retn
- Assembly
- GCA_949128165.1
- Location
- OX421918.1:11524661-11531149[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-19 5.8e-16 60.0 0.0 17 89 10 80 4 80 0.93 2 2 5.3 2.6e+04 -3.1 0.0 25 38 207 220 170 221 0.68
Sequence Information
- Coding Sequence
- ATGTTGATAAGTTCTAAATTAAATGAAAGAACACCAATCAACCGGCTGCCTATAATGGCGAAGTCGGTGCTGGATCTGTACGAGCTGTACAACCTGGTGATCGCGCGCGGCGGGCTCGTAGAAGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTACGGCTGCCGTCTTCCATCACATCCGCTGCCTTTACCTTGCGCACACAATACATGAAGTACCTATATGACTACGAGTGTGAGAAGAAGAATTTGTCGACCAGGAGCGAGTTGGACGCAGCCATCGAAGGCAACAAACGCGAGGGACGCCGCGCCTCTGGCCAGTACGACGCGCAAGCTGCGTTGGCAATGCCTCCGCTGAACCGGGTGCCGGCGTCGCTGGCGCAGCTCTCGCAGCACATGCAGCCGCTGTCGCTGACGCTGGGCGGCGTGCCGCGcctgccgccgctgccgccgcacGCGCCGCACATCAACCAGCACGACATCGAGTACCGGGTGCGGGAGTACATGAAGATGATACAGACGCAAAGGGAGCTGATGAGAAATGGTTCCGAATCGCCCCCCGGTTCCGGACCTACCCCGATGATGTCACCGCGGGACGCTGCCGCGCTCAGCGCCATCGACGTGTCGCGGCTCACGCTGTGGTCActctacaacaacaacaacaacagccCGCAGCCCGACCTCGAGCCACAACGCGAGGCCCTGAACCTGAGCGAAAGCCCCAACTCGTCGCTGACGGGCATCAAGCGCGAGGCGTGCCGGtccccgccgccgccggccaagCGCCGCACGCCGCGCCCCCCCTCCCCCGCCCCCTCCCCGCGCGCGCCCTCGCCGCCCAGGCACGGCACTCTGCCGCAGGTCAATGGGCACGGCGTCAATGGAGCGGCCTTTAAGATTACCACCAGAGgAGATGCCAGTACGGGAGACCAGCAGCTGGTGGTCTCCATCGAGCTAAACGGTGTCACGTACGAAGGCGTCCTCTTCCCCTCACAAAATGCCAGTGGACAGAACGGACACAGGCAAATGGTGTCCTAA
- Protein Sequence
- MLISSKLNERTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLTLGGVPRLPPLPPHAPHINQHDIEYRVREYMKMIQTQRELMRNGSESPPGSGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSLTGIKREACRSPPPPAKRRTPRPPSPAPSPRAPSPPRHGTLPQVNGHGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNASGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00155094;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -