Eram000590.1
Basic Information
- Insect
- Epinotia ramella
- Gene Symbol
- retn
- Assembly
- GCA_947578815.1
- Location
- OX388219.1:13491910-13501133[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-19 7.5e-16 59.2 0.0 17 89 37 107 29 107 0.93 2 2 10 3.5e+04 -3.8 0.0 25 38 234 247 219 248 0.74
Sequence Information
- Coding Sequence
- ATGTACACCAAGTGTTGTTTCCCGGAGCATCTGCTAGCACTTCCGGATGATGTATGCTACCACGGCGATGCGCACGACCATCCGTCACTTCATTACGGCCCGCAGATTAGAACACCAATAAACCGGCTGCCGATAATGGCGAAGTCGGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCGCGCGGCGGCCTCGTGGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCGGCTGCCGTCCTCCATCACGTCAGCTGCCTTTACTCTGCGCACACAATACATGAAGTACCTATATGACTACGAATGTGAAAAGAAGAACCTATCGACCCGGAGCGAGCTGGACGCGGCCATCGAGGGCAACAAGCGCGAGGGCCGCCGGGCCTCCGGGCAGTACGACGCGCAGGCTGCGCTGGCAATGCCCCCCCTGAGCCGGGTGCCGGCGTCACTCGCGCAGCTCTCGCAGCACATGCAGCCCCTCTCGCTCTCTCTCGGCGGCGTCCCGCGCCTGCCGCCGCTGCCGCCGCATGCGCCGCATATATCACAGCACGACATAGAGTACAGGGTGCGCGAGTATATGAAGATGATTCAGACGCAGAGGGAACTGATGAGGAATGGTTCGGAATCGCCGCCCGGCTCCGGGCCGACGCCGATGATGTCCCCGCGCGACGCGGCCGCGCTCAGCGCCATCGACGTGTCGCGGCTCACGCTGTGGTCGCTCTACAACAACAACAACAACAACAGCCCGCAGCCCGACCTCGAGCCACAACGCGAGGCCCTGAACTTGAGCGAGAGCCCTAACTCGTCGCTGTCGGGCATCAAGCGCGAGGCGTGCCGCTCCCCGCCGCCGCCCGCCAAGCGCCGCACCCCGCGCCCGCGCTCCCCCCCCACCTCCCCGCGCCTCCACCCCTCCCCCCCCGCGCCCGAGCCGCCGCGGGGCCTGCCGCAGCTCAACGGGAACAGCGTCAACGGGGCGGCATTCAAGATCACTACTAGAGGCGACGCCAGTACGGGAGACCAGCAGCTAGTCGTCTCCATCGAGCTGAACGGCGTCACGTACGAGGGCGTCCTCTTCCCCTCACAGAACGCCAGTGGACAGAACGGCCACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MYTKCCFPEHLLALPDDVCYHGDAHDHPSLHYGPQIRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRVPASLAQLSQHMQPLSLSLGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPGSGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSLSGIKREACRSPPPPAKRRTPRPRSPPTSPRLHPSPPAPEPPRGLPQLNGNSVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNASGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00155094;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -