Deoh009323.1
Basic Information
- Insect
- Drosophila eohydei
- Gene Symbol
- retn
- Assembly
- GCA_035045825.1
- Location
- JAWNOT010000072.1:11871100-11898250[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-26 9e-23 80.5 0.0 2 89 307 392 306 392 0.96 2 2 1.4 2.7e+03 -1.2 0.2 10 47 541 586 529 596 0.59
Sequence Information
- Coding Sequence
- ATGCAACTCCGAGTTCATCCGACTATGGATTGCAGCGGCCGTTCAAATAACAATATTGAACGCGATTCCGATTTGGGTGACGATTTGTCCCACGGCGATCGAACGGATGACGAGATGCGCGACTGCGACTCCGTAGACGGTGAACATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCTCGACTCAGTCACACAGTCGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTcagCCATCATCACCAACTGCCGCCGAATCATCCGCTTAACGCTCTGGGCAGCTTCATGGGCATCGGCGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTGCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTGGGTCTCATGGAACAGGACTATGCGGCGGCGGCACATGCAGCTGCCTTTGGGGCCAATATGCTGCCCACCACCATAAGCTCGGCCTTTCCGCTGGCCCACAATTCGGTGGCAgccgctgcggcagctgcatcCTTTGGCCATGCGGCAAGTGCAACGGCCAGCAATGGCGCCAGCTACAATGGAGGCGTCGCTGCCGCCAGCGGAGGCGCTCTAGCAGCTGGCAACAATAATACAGGTGGCACGGGTGGAGGCaatagcggcagcagcgccgcTGCCAATGCACCAGGCACtgttggcaacaacaataacagcagcagcagcaacaacaacaatgcaggCAATGGACATCCCTTTTCGTTTGCATCGCCGACAGCGCCAAGCGCCAAAGAAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAACGATGATCCCAAGCGCAAGGAGTTTCTCGAtgatttgttttcgtttatgCAAAAGCGCGGCACGCCCATCAATCGGCTGCCCATCATGGCCAAATCGGTGCTGGATCTGTACGAGCTATATAATCTGGTGATAGCACGCGGCGGCCTCGTCGACGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGTGCCGCGTTCACGCTGCGTACCCAATACATGAAGTATTTGTACCCTTACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCCGAGCTGCAGGCGGCCATCGATGGCAATCGACGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCAATGCACAATCAGATGCCGCTGACACCCATTTCGCGCGCTCCGCTGCCCGGTGGCATGCAGCAGATGTCGCCATTGGCACTGGTCACACACGCCGCGGCGGCCAACAATCAGCAGGcgcaggcagcggcagcagccgccgcagcgcACCGCCGACTGATGGGCGGACCGGCGTTTGGCCAGATGCCCAATCTGGTGACACAGGAGATCGAGAATCGCATGATGGAGTATCTGCAGCTAATACAGGCCAAGAAGGAACAGAGCGCTGGTCCTGTGCTGGCTGCCACACACaatcaccagcagcagcagcagcaacagcatcaacagcagcagcaacaacagtcgctgcatcatcatcagcagcagcagcaacagcagcagcgacagcgctCCCAGAGCCCAGAGCTGAGCACGCGCGATGCGTTGAGTGCACAGGTGGCGCTTTGGCACATGTATCACAATAGCAGTCCAAACGGTTCGGCGCACACCTCCCCACAGCAACGCGAAGCCTTGAACCTGTCCGACTCGCCGCCAACTCTGAATCTGAATCACATAAAACGTGAACGTGAACGCGATCCTACGCCGGAGCCGACGGATCATGATGAGGCACCGCATCAGCCGCCGCCAGCGAAACGCGTGGGCAGCGGTCTGATGCCACCCGGTTTTCCCGCAAACTTCTACTTGAATCCACACAACATGGCCGCTGTGGCAGCCGCCGCTGGCTTCCATCACCAggcgaacagcaacagccatcATCatctgcatcagcagcagcagcaacaggacgCAGCGTCCGACGGCGAGCCAGAGGATGACTATGGCAATGCAGAGCACAATACCACCGGCAATTCCTCGTCCATGCACGACGACAGCGAGCCACAGCAGCTGAATGGCCATCACGACGACcatcaccaccaccaccatcatcatcatcatcagaaTCATCTGGACAAATCGGATGACTCGGCCATTGAGAACTCACCCAGCACTTCCACCACAGCGTCAGCATCGGGCGGCCATCGTCACAGCTCGCCGGTCTCCACCAAGAAGAAGAGCGGGGCCAGCAAGGCGCAGTCCAGCCCCAAGGACACGCAGCACGACAACTGCACAgccggcggcagcagcgcgGCCATAAGCGGGGGAGGAGGCGTCAAGCTAAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCGCAAATGGCGAGCAGCAGTTGATTGTCAATCTGGAGCTGAATGGCATTAAGTACTCGGGCGTGCTGGTGGCCAATACAGGCGGGTCAGAGCGTCACGACGACCCCGACCCAGACAGCGAAGCAGTTGCGCCCGCTGCAGCCCTGGACGGAGGCGAGGAGCCAGCACCCGAGGAGGCCAACACTGCGACTGCACACGAGAGCAGCCAGGAAGTTAGCCAGAATGAGGCAAACGACGAGGagacgcagcaacagcagcagcagccacagccaactGAAGACATTGTCAATGGAGgcagtgtgggcgtgggcgtagGCGTGGGCTtaggtgtgggtgtgggtgtgggtgtgggtgtggggtCGCTGTTAAAAGATGCTGTAGCCAGTTCGTAA
- Protein Sequence
- MQLRVHPTMDCSGRSNNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLAHNSVAAAAAAASFGHAASATASNGASYNGGVAAASGGALAAGNNNTGGTGGGNSGSSAAANAPGTVGNNNNSSSSNNNNAGNGHPFSFASPTAPSAKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRAPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQSAGPVLAATHNHQQQQQQQHQQQQQQQSLHHHQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPNGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDHDEAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSNSHHHLHQQQQQQDAASDGEPEDDYGNAEHNTTGNSSSMHDDSEPQQLNGHHDDHHHHHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSGASKAQSSPKDTQHDNCTAGGSSAAISGGGGVKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVANTGGSERHDDPDPDSEAVAPAAALDGGEEPAPEEANTATAHESSQEVSQNEANDEETQQQQQQPQPTEDIVNGGSVGVGVGVGLGVGVGVGVGVGSLLKDAVASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00519698; iTF_00583458; iTF_00599362; iTF_00546435; iTF_00490564; iTF_00505892; iTF_00804965; iTF_00803382; iTF_00479272; iTF_00554177; iTF_00493426; iTF_00601546; iTF_00533582; iTF_00562251; iTF_00595027; iTF_00472145; iTF_00553537; iTF_00589333; iTF_00616689; iTF_00562963; iTF_00526360; iTF_00610426; iTF_00518939; iTF_00572380; iTF_00575357; iTF_00537289; iTF_00506640; iTF_00522737; iTF_00568754; iTF_00470646; iTF_00608221; iTF_00582046;
- 90% Identity
- iTF_00519698;
- 80% Identity
- -