Dacu009098.1
Basic Information
- Insect
- Drosophila acutilabella
- Gene Symbol
- retn
- Assembly
- GCA_035046005.1
- Location
- JAWNOK010000024.1:2406617-2431733[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-26 1.1e-22 80.5 0.0 2 89 324 409 323 409 0.96 2 2 2.2 4.6e+03 -1.7 0.5 7 39 566 599 540 614 0.54
Sequence Information
- Coding Sequence
- ATGCAACTTCGAGTGCATCCGACTATGGATTGTAGCGGCCGTTCAAATAACACTATTGAACGCGATTCCGATTTGGGTGACGATTTGTCCCACGGCGATCGAACGGATGACGAGATGAGGGACTGTGATTCGGTGGACGGGGAGCATCATCAGCTGAGCGCAAAGGCCGCAATTGCAGCTCGTCTTAGCCACACAGTCGCCGGCGGAGCTGGCCTCAATTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGCCATCACCATCAGTTGCCACCGAATCATCCGCTAAATGCTCTGGGCAGCTTCATGGGCATCAGTGGACTACACAGCATTCCAAATCTACAGCACAGCGATGTCCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGTCTCATGGAACAGGActatgcagcagcagcacacgCTGCTGCCTTTGGAGCCAACATGTTGCCCACAACAATCAGTTCCGCCTTTCCCCTGCCCCACAATTcggtggcagcggcagcagcggcggcggcagcggccTCCTTTGGCCCTGTGCCAACGGCGAGCAATGGCGGCGCTTACAATGGTGCCACAAGTGGAGGCAACAATGTTGGAGTTGCAGCAACGGGAGCAGCTGTGGCAGGTAATAACAGCgctggagcaggagcaggTGGTGGAGGAGGTGTAGGAGCAGGCGGAGGCGGGGGCTTAAATGCAGCTGGCACAGGCAACAATTCAGtgagtggcaacaacaacagcagcaacaacaacaacaacaatggtcaTCCCTTCTCATTTGCATCGCCAACAGCGCCAAGCGCCAAAGAAGCACTTCATTTTACAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTGTATGAAATCAATGATGATCCGAAGCGCAAGGAGTTTCTCGatgatttgttttcatttatgcAAAAGCGCGGCACGCCCATCAATCGGCTGCCCATAATGGCTAAATCAGTGCTGGATCTATATGAGCTATACAATTTGGTAATAGCACGCGGCGGTCTGGTCGATGTAATCAACAAGAAATTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCCGCATTCACGCTGCGCACCCAATACATGAAGTATCTTTACCCATACGAGTGCGAAAAAAAGAATCTCAGCACACCGGCTGAACTGCAGGCGGCCATCGATGGCAATCGCCGTGAAGGACGCCGCTCCAGCTATGGCCAATACGAGGCCATGCACAATCAGATGCCGCTGACGCCCATTTCACGGCCTACATTGCCgggtggcatgcaacaaatgTCGCCATTGGCTCTGGTCACACATGCCGCGGCTGCCAACAATCAGCAGgcgcaggcagcagcagcggcggcggcagcgcaTCGGCGTTTGATGGGTGGACcggcttttggccaaatgccCAATCTGATGACGCAAGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTAATACAGGCCAAGAAGGAGCAGAATGCTGGCCCTGTGCTTGGTGCCACACAtccacatcagcagcagcaacaacaacagcagcaacagtcgctgcatcatcaccagcagcagcaacagcagcaacaacaacaacagcagctgcagcagcagcagcgtcaacgCTCGCAGAGTCCCGAGCTGAGCACGCGCGATGCGTTGAGTGCACAGGTGGCGCTGTGGCACATGTACCACAACAGCAGTCCAACTGGCTCAGCCCACACCTCTCCCCAGCAACGCGAAGCTTTGAACCTCTCGGACTCGCCACCGAATCTGAACTTGAGTCACATTAAGCGCGAACGTGAACGGGACCCAACACCAGAGCCAGCGGATCATGAGGACGCACCGCATCAACCGCCGCCAGCTAAACGTGTTGGCAGCGGTCTGATGCCACCAGGTTTTCCCGCTAACTTCTACTTGAATCCACACAATATGGCCGCTGTGGCAGCCATTACccagcatcatcatcaccatcagcagcaacagcagcagcaacaggacgCTGCGTCCGAGGGTGAACCAGAGGATGATTATGGAAATACGGAGCACAATACCACAGGCAACTCGTCGTCCATGAACGATGACAATGAGCCACAGCAGCTGAATGGAcatcaccaccaccatcaccatcatcatcataatcagaATCATTTGGACAAATCGGATGATTCGGCTATTGAGAACTCACCCAGCACTTCCACAACGGCCTCTGCATCTGGTGGCAATCGTCACAGCTCGCCAGTGTCCACCAAGAAGAAGAATGGCAGCAGTAAAGCCCAATCGAGTTCCAAggaggcaacagcagcacatgACCATACCAACGGTGCtggtagtggtggtggtgtcaAGCTAAATCCCCTCGAGACACTCAGTCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCAGCGAGAATGGAGAACAGCAGTTGATTGTCAACCTGGAGCTAAATGGCATTAAGTACTCCGGTGTCCTGGTAGCCAATGCAGTTGCACTCGCcaccgctgccgccgctgctgccgaGTCAAGGGACGAGGCTAACGATGCGGCAAATGCCGAGGACGATGACGAtgccgacgacgacgacaacgaggGCGATGTCAGAGCCGAGGAGCCCGCGTCGGAGGAGGTCAAGCATGATAAAAGCATGGAAGTCAATAGTCAGAGCGAGACAGCTGATGAGGAGGCGGAGCAGACCATGGAGGACAACATTGTGAATGGTGTGAGCGGCAATGGGGTGGCGACTGTGGGCGTAAACCAGCTTAAAGATGCTGTGGTCAGTTCATAA
- Protein Sequence
- MQLRVHPTMDCSGRSNNTIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGISGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHNSVAAAAAAAAAASFGPVPTASNGGAYNGATSGGNNVGVAATGAAVAGNNSAGAGAGGGGGVGAGGGGGLNAAGTGNNSVSGNNNSSNNNNNNGHPFSFASPTAPSAKEALHFTANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPTLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLMTQEIENRMMEYLQLIQAKKEQNAGPVLGATHPHQQQQQQQQQQSLHHHQQQQQQQQQQQQLQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPNLNLSHIKRERERDPTPEPADHEDAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAITQHHHHHQQQQQQQQDAASEGEPEDDYGNTEHNTTGNSSSMNDDNEPQQLNGHHHHHHHHHHNQNHLDKSDDSAIENSPSTSTTASASGGNRHSSPVSTKKKNGSSKAQSSSKEATAAHDHTNGAGSGGGVKLNPLETLSLLSGMQFQVARNGTSENGEQQLIVNLELNGIKYSGVLVANAVALATAAAAAAESRDEANDAANAEDDDDADDDDNEGDVRAEEPASEEVKHDKSMEVNSQSETADEEAEQTMEDNIVNGVSGNGVATVGVNQLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- iTF_00568754;
- 80% Identity
- -