Dmac004463.1
Basic Information
- Insect
- Drosophila macrospina
- Gene Symbol
- retn_1
- Assembly
- GCA_035042075.1
- Location
- JAWNLW010000284.1:2690923-2707494[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-26 7.8e-23 80.6 0.0 2 89 290 375 289 375 0.96 2 2 1.7 2.9e+03 -1.3 0.2 7 44 525 565 509 577 0.61
Sequence Information
- Coding Sequence
- ATGGAGATGAACATGTCCCACGGCGATCGAACGGATGACGAGATGAGGGACTGTGATTCCGTGGACGGGGAACACCATCAGCTGAGCGCGAAGGCGGCAATTGCAGCACGACTCAGTCACACAGTCGCCGGCGGTGCTGGCCTCAATTTTGCCAGTCCGGAGCAGCAAACAGATCTGCCGCttggccatcatcatcatcagttgCCTCCGAATCATCCGCTGAATGCCCTTGGCAGCTTCATGGGCATCAGTGGGCTACACAGCATTCCAAATCTACAGCACAGCGATGTCCTCGAGAAGCTTAAGATGCAAGTGCGGGACATGAAGGTTGGTCTCATGGAACAGGACTACGCGGCAGCGGCACATGCGGCAGCGTTTGGGGCCAACATGTTGCCCACCACCATTAACTCGGCCTTTCCGTTGCCCCACAAtgcggtggcagcagcagcggcagccgcaTCCTTTGGCCCCGTGCCGCCGGCCAGCAATGGCGCCAGCTACAATGGTGCGGCTGGTGGAGGGGCGAACGTTGGAGCGGGAACAggtgcaggagcagcaggtgCTATTAACACGGCCAGTAACAATGGAGGCAACAGtggaggagtaggaggaggcgtgagtggcagcaacagcagcagcagcaacaacaacaacaacaacaacaatgccggCAATGGTCATCCCTTCTCGTTTGCCTCGCCGACAGCGCCAAGCGCCAAAGAAGCGCGCCACTTTACAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAACGATGATCCGAAGCGCAAGGAGTTCCTCGATGATTTGTTTTCGTTTATGCAAAAGCGCGGCACGCCCATCAATCGGCTGCCCATAATGGCCAAATCGGTGCTGGATCTTTATGAACTATACAATTTGGTGATAGCACGCGGTGGCCTTGTCGATGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCCGCATTCACGCTACGCACCCAATACATGAAGTATCTCTACCCGTACGAGTGCGAAAAGAAGAATCTCAGCACACCGGCCGAGTTGCAGGCGGCCATTGATGGCAATCGTCGTGAAGGACGTCGCTCCAGCTATGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACGCCCATTTCACGTCCACCACTGCCgggtggcatgcaacaaatgtCGCCACTGGCGCTGGTCACACACGCCGCGGCAGCCAACAATCAACAGGcccaggcagcagcagcagcggcagcggcgcaTCGTCGATTGATGGGCGGACCGGCATTTGGCCAGATGCCCAATCTGGTGACACAGGAGATCGAGAATCGCATGATGGAGTATCTGCAGTTAATTCAGGCCAAGAAGGAGCAGAATGCTGGCCCTGTGCTTGGCGCCACCCATccccaccagcagcagcagcagcagcaacagtcgctgcatcatcaccagcagcagcagcagcagcagctgcagcaacaacaacaacagcgacaacgctCTCAGAGTCCCGAGTTGAGCACGCGCGATGCGTTGAGCGCGCAGGTGGCGCTTTGGCATATGTACCACAACAGCAGTCCAACTGGCTCGGCCCACACGTCACCACAGCAACGCGAAGCCTTGAACCTCTCAGACTCGCCGCCGAATCTCAATCTGAGCCACATTAAACGCGAACGTGAACGTGATCCAACACCTGAGCCGGCGGATCATGAGGATGCACCGCATCAGCCGCCACCAGCCAAACGGGTTGGCAGCGGCCTTATGCCCCCTGGTTTTCCTGCAAACTTTTACTTGAATCCACACAACATGGCCGCGGTGGCAGCCATaacccatcatcatcatcatcagcagcagcagcaacaggacgCAGCGTCCGAGGGCGAGCCGGAGGATGATTACGGCAATGCGGAGCACAATACTACAGGCAATTCGTCGTCTATGAACGATGACAATGAGCCACAGCAGCTGAATGGACATCACCACCACCtccaccatcatcatcatcagaaTCATTTGGATAAGTCAGATGATTCGGCCATTGAGAACTCACCCAGCACATCCACGACGGCCTCCGCATCCGGCGGACATCGTCACAGCTCGCCGGTGTCGACCAAAAAGAAGAACGTCAGCAGTAAAGCACAGTCCAGTCCCAAGGATGCACAGCACGAGGAGTGCACAGCCAATGGCGGTGCCAAGTTAAATCCCCTCGAGACACTGAGTCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCGCCAATGGTGAACCGCAGTTGATTGTCAACCTGGAGCTGAATGGCGTTAAGTACTCGGGTGTCCTGGTCGCCAATGCAGCCAGAGCAGAGCCAAGAGCCGAAGACTCGGATacagcaaatgcagctgccACGTCCGAGGAGTCGGCGTCCGAGGAGGCTAGCAATGCGGTCAAGCATGATAATAGCCAGGAAGTCAGCCAGAACGAGGCAATTGACGAGGACGAAACGGAGCAGCCCACAGATGACATTGTGAATGGAGTGGGCGGTGGTGGCAATGGGGGGACTGTGGGCGTAACCTCTCTGCTTAAAGATGCTGTGGTCAGTTCGTAA
- Protein Sequence
- MEMNMSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLGHHHHQLPPNHPLNALGSFMGISGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTINSAFPLPHNAVAAAAAAASFGPVPPASNGASYNGAAGGGANVGAGTGAGAAGAINTASNNGGNSGGVGGGVSGSNSSSSNNNNNNNNAGNGHPFSFASPTAPSAKEARHFTANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQNAGPVLGATHPHQQQQQQQQSLHHHQQQQQQQLQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPNLNLSHIKRERERDPTPEPADHEDAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAITHHHHHQQQQQQDAASEGEPEDDYGNAEHNTTGNSSSMNDDNEPQQLNGHHHHLHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKNVSSKAQSSPKDAQHEECTANGGAKLNPLETLSLLSGMQFQVARNGTGANGEPQLIVNLELNGVKYSGVLVANAARAEPRAEDSDTANAAATSEESASEEASNAVKHDNSQEVSQNEAIDEDETEQPTDDIVNGVGGGGNGGTVGVTSLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- iTF_00533582;
- 80% Identity
- -