Dpha022204.1
Basic Information
- Insect
- Drosophila phalerata
- Gene Symbol
- retn
- Assembly
- GCA_951394115.2
- Location
- OY729850.1:16917025-16934459[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-26 1.5e-22 80.3 0.0 2 89 417 502 416 502 0.96 2 2 3.3 7.3e+03 -2.0 0.6 8 38 657 695 636 709 0.53
Sequence Information
- Coding Sequence
- ATGTTTAAGCACAGTGTACTCAGATTCATAGATTCGTTTGCATTCTGCGCCAACTTCAAAGAATTCTTGGAACTGCACTGCACTCTCTTCCATGGTCTTGGAACTTGGTCTTTCCCACACTCTCCTCATCCTAGTATTGTCAATGTATGCTTTGGTTTTGGTTGCATTTATGATTACAGCAatgcgacaacaacgacaacaacgacaacaacgacaccaAAGACGAAGACGACGATAAATGTTGTATATACACATGGATGCGAGCTGTGGTCCgtcgatgatgatgctgatcatgatcatgatgatgatgaggttgatgatGATCTAGCCTGGCCTAACCTGGGCATGGCCTGGCCAATACTTTGGCTTACTTTGTGCAACGCTGGTTACTTTTCCCACGGCGATCGAACGGATGACGAGATGAGGGACTGCGATTCCGTGGACGGTGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCCGCTCGTCTCAGTCACACAGTCGCCGGCGGTGCTGGTCTCAATTTTGCCAGTCCGGAGCAGCAAACAGATCTGCCACTCAGCCATCATCATCAGCTGCCTCCGAATCATCCGCTTAATGCCCTTGGCAGCTTCATGGGCATCAGTGGACTACACAGCATTCCAAATCTACAGCACAGCGATGTTCTCGAGAAACTCAAGATGCAAGTTCGTGACATGAAAGTTGGTCTCATGGAACAGGACTATGCAGCAGCGGCACATGCAGCCGCCTTTGGAGCCAACATGTTGCCCACAACGATCAGCTCGGCCTTTCCGCTGCCCCACAACtcggtggcagcagcagcagcggcagctgcATCCTTTGCCCCCATGCCACCAACCAGCAATGGCGCCACTTACAATGGTGCGGCAACTGGAGGAAACAATGtggcagcaggagcagcagcagcagcagctgctgttaACGCGGTCAGCAATAATGGAGCTAATACAGCTGGAGGAGGGGGAGGaggcaacaacagtaacaacaacaatgcagtaagcggcaacaacaacaacaacaacagcagcagcaatggaCATACCTTCTCATTTGCATCGCCAACAGCGCCAAGCGCCAAAGAAGCGCGCCACTTTACAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGcTCTATGAAATTAATGATGATCCCAAACGCAAGGAGTTTCTCGAtgatttgttttcatttatgCAAAAGCGCGGCACGCCCATCAATCGCCTGCCCATAATGGCCAAATCGGTGCTGGATCTTTATGAACTATACAATTTGGTGATAGCACGCGGCGGACTTGTCGATGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCCGCATTCACGCTACGCACCCAATACATGAAGTATCTCTACCCATACGAATGCGAGAAGAAGAACCTCAGCACACCGGCCGAGCTACAGGCGGCCATCGATGGCAATCGTCGTGAAGGACGCCGTTCCAGCTATGGCCAATACGAAGCCATGCACAATCAGATGCCACTGACGCCCATTTCACGTCCGCCTCTGCCGGGTGGCATGCAACAAATGTCGCCACTGGCGCTCGTCACACACGCCGCGGCAGCCAACAATCAACAGGCACAGgcagcagcggcggcggcagcagcgcATCGTCGATTGATGGGCGGACCGGCATTTGGCCAGATGCCCAATCTGGTGACACAGGAGATCGAGAATCGCATGATGGAGTATCTGCAGCTAATACAGGCCAAGAAGGAGCAGAATGCTGGCCCAGTGCTTGGCGCCACACATCcccaccagcaacagcagcagcaacagtcgctgcatcatcatcaacagcagcagcagcaacaacaacaacaacaacagctacagcagcaacagcagcagcaacaacaacaacagcgacaacgctCTCAAAGTCCGGAGTTGTCAACGCGCGATGCGTTGAGCGCGCAGGTGGCGCTTTGGCACATGTACCACAACAGCAGTCCAACTGGGTCCGCCCACAGTCCACAGCAACGCGAAGCCTTGAATCTCTCCGACTCGCCGCCAAATCTCAATCTGAGTCACATAAAGCGCGAACGCGAACGTGATCCAACACCAGAGCCGGCGGATCATGAGGATGCACCGCATCAACCGCCACCAGCGAAACGTGTGGGCAGCGGACTGATGCCACCTGGTTTTCCTGCCAACTTCTACTTGAATCCACACAATATGGCCGCTGTGGCCGCCATCacccatcatcatcaccatcagcagcagcaacaggacgCAGCGTCCGAGGGAGAACCGGAGGATGATTATGGAAATGCGGAACACAATACCACGGGCAATTCATCGTCAATGAACGATGACAATGAGCCGCAGCAGCTGAATGGACATCATCACcaccaccatcatcatcatcatcagaaTCATCTGGACAAGTCGGATGACTCGGCCATTGAGAATTCACCCAGCACTTCCACAACGGCATCCGCATCCGGCGGACATCGTCACAGCTCGCCGGTGTCCACAAAAAAGAAGAATGCGAGCAGTAAGGCACAGTCGAGTCCCAAGGATGCACAGCACGAGAATAGCACAGCCAACGGCGGTGCCAAGTTGAATCCCCTCGAGACACTCAGTCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACAGGAGCCAATGGTGAGCAGCAGTTGATTGTCAACCTGGAGCTGAATGGCGTTAAGTACTCGGGTGTCCTGGTCGCCAATGCAGCAGCAGCCGGCAGAACAGATCCAAGAGTCGAGGACTCGGACACGGTAAATGCTGTAAATGCAAATGCCAAGTCCGAGGAGGAGGAGACTGCTTCCGAGGAGGCTTGCAATGCGGTCAAGCATGATAATAGCCAGGAAGTCAGCCAGAACGAGGCAATTGACGAGGAGGAGCCGGAGCAGACCACGGATGACATTGTGAATGGAGTGGGCGGAGTGGGCGGTGTTGGCAATGGGGGCGTAACCCTGCTTAAAGATGCTGTGGTCAGTTCGTAA
- Protein Sequence
- MFKHSVLRFIDSFAFCANFKEFLELHCTLFHGLGTWSFPHSPHPSIVNVCFGFGCIYDYSNATTTTTTTTTTPKTKTTINVVYTHGCELWSVDDDADHDHDDDEVDDDLAWPNLGMAWPILWLTLCNAGYFSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGISGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHNSVAAAAAAAASFAPMPPTSNGATYNGAATGGNNVAAGAAAAAAAVNAVSNNGANTAGGGGGGNNSNNNNAVSGNNNNNNSSSNGHTFSFASPTAPSAKEARHFTANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQNAGPVLGATHPHQQQQQQQSLHHHQQQQQQQQQQQQLQQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHSPQQREALNLSDSPPNLNLSHIKRERERDPTPEPADHEDAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAITHHHHHQQQQQDAASEGEPEDDYGNAEHNTTGNSSSMNDDNEPQQLNGHHHHHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKNASSKAQSSPKDAQHENSTANGGAKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGVKYSGVLVANAAAAGRTDPRVEDSDTVNAVNANAKSEEEETASEEACNAVKHDNSQEVSQNEAIDEEEPEQTTDDIVNGVGGVGGVGNGGVTLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- iTF_00533582;
- 80% Identity
- -