Dkan008213.1
Basic Information
- Insect
- Drosophila kanekoi
- Gene Symbol
- retn
- Assembly
- GCA_037075305.1
- Location
- JBAMCE010000346.1:2205684-2222833[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.8e-26 1e-22 80.4 0.0 2 89 343 428 342 428 0.96 2 3 3.5 7.4e+03 -2.5 0.2 21 39 588 611 558 625 0.52 3 3 5.5 1.1e+04 -3.1 0.2 57 80 692 716 689 720 0.65
Sequence Information
- Coding Sequence
- ATGCGCCAATATGTGCCCACAATGAAGATGGAGCTGCTCACGGAGACGGAGATGgaggcgatggcgatggcgaacGCGggggcggaggcggaggcTGTTGCCACCAAACAGAGGCGAGAGCAAGACTCCCACGGCGATCGCACGGATGACGAGATGCGCGACTGCGATTCCGTCGACGGTGAACATCATCAGCTGAGCGCCAAGGCGGCAATTGCCGCACGTCTCAGTCACACAGTCGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCCGAGCAGCAAACAGATCTGCCACTCAGCCATCACCATCAACTGCCGCCGAATCATCCGCTTAACGCGCTGGGCAGCTTCATGGGCATCGGCGGCCTACACAGCATTCCAAATCTCCAGCACAGCGATGTTCTCGAGAAGCTCAAGATGCAAGTGCGTGACATGAAAGTGGGTCTCATGGAACAGGACTATGCAGCAGCGGCCCATGCGGCCGCCTTTGGCGCCAATATGCTGCCCACGACGATCAGCACGGCCTTTCCGCTGCCGCACAATTCGGTGGCTGCGGCCGCGGCAGCTGCATCCTTTGGCCATGCGGCCAATCCGTCCGTGCCGTCAGCCAGCAACGGCGCCAGCTACAATGGTGCAGCTCTTGgggcaggagcagctgcagcaatggGCAGCGCCGGCGCCGGCAACAATAATGGAGCCAGCAGCGGCGCAGGTGGAggcagcgccaacaacaacaacagcagcagcagcagcaacaacaatgcggccGGCAATGCtggtggcaacaacaacaacagcaacaacaacaacagcagcaacaacaacaacagcagcaacaacaatgccggCAATGGGCATCCCTTCTCGTTTGCATCGCCGACAGCGCCGAGCGCCAAAGAAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTCTCGTTTATGCAAAAGCGCGGCACGCCCATCAATCGCCTGCCCATAATGGCCAAATCTGTGCTGGATCTGTATGAGCTATACAATCTGGTGATAGCCCGCGGCGGCCTTGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGGCTGCATCTGCCCTCGAGCATCACCAGTGCCGCATTCACGCTGCGCACACAATACATGAAGTATCTGTACCCTTACGAGTGCGAGAAGAAGAACCTGAGCACACCCGCCGAGCTGCAGGCGGCCATTGATGGCAATCGCCGCGAAGGACGCCGTTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCGCTGACGCCCATTTCGCGACCACCGCTGCCGGGTGGCATGCAACAGATGTCACCCTTGGCGCTGGTCACACACGCCGCAGCGGCCAACAATCAGCAGgcgcaggcagcggcagccgccgcagcagcgcaCCGCCGTCTGATGGGCGGTCCGCCATTTGGCCAGATGCCCAATCTGGTCACACAGGAGATCGAGAATCGCATGATGGAGTATCTGCAGCTGATACAGGCCAAGAAGGAGCAGAGCGCGCCAGTGCTGCCACAcaaccatcagcagcagcagcagcagcagcaacagtcactGCATcatcaccaacaacaacaacaacaacagcagcagcagcaacagcagcagcggcagcgctcACAAAGTCCCGAGCTGAGCACGCGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCTCTGAACCTGTCCGATTCGCCGCCAACTCTCAATCTGAACCATATAAAACGTGAACGCGAACGCGATCCAACGCCTGAGCCGGCGGATCAGGAGGATGCACCACATCAGCCACCGCCGGCGAAACGGGTGGGCAGCGGCCTGATGCCACCCGGTTTCCCGGCGAACTTTTACTTGAATCCACACAACATGGCCGCCGTGGCAGCCGCCGCGGGCTTCCACCACCAGCAAcaggccaacagcaacagccaccatcagctgcatcagcagcatcagcagctgcagcagcaggatgcCGCATCCGATGGCGAGCCAGAGGATGACTATGCCAATGCGGAGCACAATACCACCGGCAATTCGTCCTCCTTGCACGACGACAGCGAGCCGCAGCAACTGAACgggcaccaccaccaccatctgcatcaccaccaccagcaccaccatcATTCGCATCATCAGAACCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCCAGCACTTCCACAACAGCATCGGCTTCGGGCGGCGGCCACCGTCACAGCTCGCCGGTGTccacaaagaagaagagcagcgGGAGCAAGGCGCAGTCCAGTTCGAAGGACGGCAGCTGCACAGCTGAAgggggcggcggcagcggcagcggcaacggcagcagcgggGCCACAACTGGAGCCGGCGTTAAGCTGAATCCCCTCGAGACACTCAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGAGCAAACGGCGAACAGCAGTTGATTGTCAATCTGGAGCTGAACGGCATTAAGTACTCGGGTGTGCTGGTGGCCAATGCAGCCGGGCCCGAGCAGAGCGAGCAGCCGGACACAGATGCGGACGCCGAGACGCCCACAGCTGCCGAGGAGCCGGCGCACGACGAGGCCGCCCACGATGCCAGCCAGGAGTGCAGCCAGAACGAGGCAatcgacgaggaggaggaggaggacgacgaggagcagacgcagcagcagcagcagcacacggAGGATATTGTGAATGGCAACAGTGCGGTCGGTgtgggtgcgggtgcgggtgtgggtgtgagtgtgggcGTTGGATTGGGCTCGGTGGGCGTGTCTCTGCTAAAAGATGCGGTGGTCAGCTCGTAA
- Protein Sequence
- MRQYVPTMKMELLTETEMEAMAMANAGAEAEAVATKQRREQDSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISTAFPLPHNSVAAAAAAASFGHAANPSVPSASNGASYNGAALGAGAAAAMGSAGAGNNNGASSGAGGGSANNNNSSSSSNNNAAGNAGGNNNNSNNNNSSNNNNSSNNNAGNGHPFSFASPTAPSAKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPPFGQMPNLVTQEIENRMMEYLQLIQAKKEQSAPVLPHNHQQQQQQQQQSLHHHQQQQQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPADQEDAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQQQANSNSHHQLHQQHQQLQQQDAASDGEPEDDYANAEHNTTGNSSSLHDDSEPQQLNGHHHHHLHHHHQHHHHSHHQNHLDKSDDSAIENSPSTSTTASASGGGHRHSSPVSTKKKSSGSKAQSSSKDGSCTAEGGGGSGSGNGSSGATTGAGVKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVANAAGPEQSEQPDTDADAETPTAAEEPAHDEAAHDASQECSQNEAIDEEEEEDDEEQTQQQQQHTEDIVNGNSAVGVGAGAGVGVSVGVGLGSVGVSLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- iTF_00616689;
- 80% Identity
- -