Dbor001281.2
Basic Information
- Insect
- Drosophila borealis
- Gene Symbol
- retn
- Assembly
- GCA_035045885.1
- Location
- JAWNOR010000040.1:1838034-1855198[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.4e-26 1.2e-22 80.4 0.0 2 89 354 439 353 439 0.96 2 3 4.1 9.2e+03 -2.6 0.1 21 40 597 621 570 634 0.53 3 3 8.6 1.9e+04 -3.6 0.1 58 81 702 725 699 729 0.62
Sequence Information
- Coding Sequence
- ATGCGCCAATATGTGCCCACAAAGAAGATGGAGCTGCTCACGGAGACGAAGATGGGGACAGAGATGGAGACGGAGATGgaggcgatggcgatggcgaagGCGGAGGCTGTTGCCACCAAACAGAGGCAAGAGCAAGACTCCCACGGCGATCGCACGGATGACGAGATGCGCGACTGCGATTCCGTCGACGGTGAACATCATCAGCTGAGCGCCAAGGCGGCAATTGCCGCACGTCTCAGTCACACAGTCGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCCGAGCAGCAAACAGATCTGCCACTCAGCCATCATCATCAACTGCCGCCGAATCATCCGCTTAACGCGCTGGGCAGCTTCATGGGCATCGGCGGCCTACACAGCATTCCAAATCTCCAGCACAGCGATGTTCTCGAGAAGCTCAAGATGCAAGTGCGTGACATGAAAGTGGGTCTCATGGAACAGGACTATGCAGCAGCGGCACATGCGGCCGCCTTTGGCGCCAATATGCTGCCCACGACGATCAGCACGGCCTTTCCGCTGCCGCACAATTCGGTGGCAGCGGCCGCGGCAGCTGCATCCTTTGGCCATGTGGCCAATGTGTCCGTGCCGCCAGCCGCCAGCAACGGCGCCAGCTACAATGGTGCAACTGTTGGcgcaggagcagctgcagcaatgGGCAGCGCAGGCGCCGGCAACAATAATGGAGCCAGCAGCGGCACAGGTGGAGGCAGcgccgccaacaacaacaacaacaacaacaacggcagcagcagcagcaacaacaatgcgacaGGCAATGCtggtggcaacaacaacaacaacagcagcaacaacggcagcaacaacaacaacaatgccggCAATGGGCATCCCTTCTCGTTTGCATCGCCGACAGCGCCGAGCGCCAAAGAAGCGCGCCACTTTGCAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTCTCGTTTATGCAAAAGCGCGGCACGCCCATCAATCGGCTGCCCATAATGGCCAAATCGGTGCTGGATCTGTATGAGCTATACAATCTGGTGATAGCCCGCGGCGGCCTTGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATAATCAAGGGGCTGCATTTGCCGTCGAGCATCACCAGTGCCGCCTTCACGTTGCGCACACAATACATGAAGTATCTGTACCCTTACGAGTGCGAGAAGAAGAACCTGAGCACACCCGCCGAGCTGCAGGCGGCCATTGATGGCAATCGGCGCGAAGGACGCCGATCCAGCTACGGCCAATACGAGGCCATGCACAACCAGATGCCGCTGACGCCCATTTCGCGACCACCGCTGCCGGGTGGCATGCAACAGATGTCACCCTTGGCGCTGGTCACACACGCCGCAGCGGCCAACAATCAGCAGGcgcaggcagcggcagccgccgcagcagcgcaCCGCCGTCTGATGGGCGGTCCGCCATTTGGCCAGATGCCCAATCTGGTCACACAGGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTGATACAGGCCAAGAAGGAGCAGAGCGCGCCAGTGCTGCCACACaaccatcagcagcagcagcagcagcagcaacagtcgctGCATcatcaccaacaacaacagcagcaacagcagcagcagcagcaacggcagcgctCTCAGAGTCCCGAGCTGAGCACGCGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCTCTGAACCTCTCGGACTCGCCGCCAACTCTCAATCTGAACCACATAAAACGTGAACGCGAACGCGAACCAACGCCTGAGCCGGCGGATCAGGAGGATGCACCGCATCAGCCGCCGCCGGCGAAACGGGTGGGCAGCGGCCTGATGCCGCCCGGTTTTCCGGCAAACTTTTACTTGAATCCACACAACATGGCCGCCGTAGCTGCCGCCGCGGGCTTCCACCACCAAcaggccaacagcaacagccaccatcagctgcatcagcagcaccagcagctgcagcagcaacagcagcaggatgCTGCGTCCGATGGCGAGCCAGAGGATGACTATGCCAATGCGGAGCACAATACCACCGGCAATTCGTCCTCCTTGCACGACGACAGCGAGCCCCAGCAGCTGAACGGGCACCACCACCATCATCTGCAtcaccaccaccagcaccaccatcATTCGCATCATCAGAACCATCTGGACAAGTCGGATGACTCGGCCATTGAAAACTCACCCAGCACTTCCACAACAGCATCGGCTTCGGGCGGCGGCCATCGTCACAGCTCGCCGGTGTCCACCAAGAAGaagagcagcggcagcaaggcGCAGTCCAGTTCGAAGGACGGCAGCTGCACAGCTGAAGggggcggcggcagcggcagcgccagcagcagcgggggCATAACCGGAGCCGGCGTTAAGCTGAATCCCCTCGAGACACTCAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCGCAAACGGCGAACAGCAGCTGATTGTCAATCTGGAGCTGAACGGCATTAAGTACTCGGGTGTGCTGGTGGCCAATGCAGCAGCCGGGCCCGAGCAGAGCGACCAGCCGGACACAGATGCGGACGCCGAGACGCCCACAGCTGCCGAGGAGCCGGCGCACGACGAGGCCGCCCACGATGCCAGCCAGGAGTGCAGCCAGAACGAGGCaatcgacgaggaggaggaggaggaggatgaggagcagacacagcagcagcagcagcagcagcacacggAGAATATTGTGAATGGCAGCAGTGCGGTCGgtgtgggtgtgagtgtgggCGTTGGATTGGGCTCGGTGGGCGTGTCTCTGCTAAAAGATGCGGTGGTCAGCTCGTAA
- Protein Sequence
- MRQYVPTKKMELLTETKMGTEMETEMEAMAMAKAEAVATKQRQEQDSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISTAFPLPHNSVAAAAAAASFGHVANVSVPPAASNGASYNGATVGAGAAAAMGSAGAGNNNGASSGTGGGSAANNNNNNNNGSSSSNNNATGNAGGNNNNNSSNNGSNNNNNAGNGHPFSFASPTAPSAKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPPFGQMPNLVTQEIENRMMEYLQLIQAKKEQSAPVLPHNHQQQQQQQQQSLHHHQQQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKREREREPTPEPADQEDAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQQANSNSHHQLHQQHQQLQQQQQQDAASDGEPEDDYANAEHNTTGNSSSLHDDSEPQQLNGHHHHHLHHHHQHHHHSHHQNHLDKSDDSAIENSPSTSTTASASGGGHRHSSPVSTKKKSSGSKAQSSSKDGSCTAEGGGGSGSASSSGGITGAGVKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVANAAAGPEQSDQPDTDADAETPTAAEEPAHDEAAHDASQECSQNEAIDEEEEEEDEEQTQQQQQQQHTENIVNGSSAVGVGVSVGVGLGSVGVSLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- iTF_00616689;
- 80% Identity
- -