Dtes016210.2
Basic Information
- Insect
- Drosophila testacea
- Gene Symbol
- retn
- Assembly
- GCA_035043265.1
- Location
- JAWNND010000858.1:1185406-1201026[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-26 1e-22 80.6 0.0 2 89 314 399 313 399 0.96 2 2 1.8 3.8e+03 -1.4 0.2 7 41 548 588 534 602 0.59
Sequence Information
- Coding Sequence
- ATGGTGGCGCGGCCAAGCGTGGCGGACTTCTTTGCCAGAGTCACGGCTGGCAATAGTACGCTTGAAACGTCCCACGGCGATAGAACGGATGACGAGATGAGGGACTGCGATTCCGTGGACGGTGAACATCATCAGCTGAGCGCCAAGGCGGCAATTGCTGCTCGTCTCAGTCACACAGTTGCCGGCGGTGCTGGTCTCAATTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcagctgcCTCCGAACCATCCGCTTAATGCTCTTGGCAGCTTCATGGGCATCAGTGGACTACACAGCATTCCAAATCTACAGCACAGTGATGTACTCGAGAAACTCAAGATGCAAGTGCGTGACATGAAAGTTGGTCTCATGGAACAGGActatgcagcagcagcacatgCGGCTGCCTTTGGAGCCAACATGTTGCCCACAACGATCAGCTCGGCCTTTCCCTTGCCCCACAATTCGGTGGTGGCAGCTGCGGCAGCCGCATCCTTTGGCCCCGTGCCGCCTGCCAGCAATGGCGCCAGTTACAATGGTGCAACAAGTGGAGGCACCACTGTTGCAGCAGGAggagttgctgctgccaacAATAATGGTGCTGGAGGAGGTGGTGGcacaggaggaggaggtggaggaggagtTGCTGGAGCAGGTGGaggcaatagcaacaacaacaataataacaacaacaatgcagtgactggcaacaacaacaacaacaacaatggacaTCCCTTCTCATTTGCATCGCCGACAGCGCCAAGTGCCAAAGAAGCGCGCCACTTTACAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTGTATGAAATTAATGATGATCCCAAGCGCAAGGAGTTTCTCGAtgatttgttttcatttatgcAAAAGCGCGGCACGCCCATCAATCGCCTGCCCATAATGGCCAAATCGGTGTTGGATCTTTATGAGCTATACAATTTGGTGATAGCACGCGGCGGCCTGGTCGATGTGATCAACAAGAAGCTATGGCAGGAGATCATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCCGCATTCACACTACGCACCCAATACATGAAGTATCTCTACCCATATGAGTGCGAAAAGAAGAACCTCAGCACACCTGCCGAACTGCAGGCGGCCATTGATGGCAATCGTCGTGAAGGACGTCGATCCAGCTATGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACACCCATTTCACGCCCATCGTTACCgggtggcatgcaacaaatgTCGCCACTGGCGTTGGTCACACACGCCGCGGCAGCTAACAATCAACAGGcacaggcagcagcagccgcgGCAGCAGCACACCGTCGACTGATGGGTGGACCGGCTTTTGGACAGATGCCCAATCTGGTGACACAGGAGATTGAGAATCGGATGATGGAGTATCTGCAGCTAATACAGGCCAAGAAGGAGCAGAGTGCTGGCCCAGTGCTTGGCGCCACACATCcccatcagcaacaacagcagcagcaacagtcgctgcatcatcaccaacaacaacagcagcaattgcagcagcagcagcaacaacaacaacagcgacaacgcTCTCAAAGTCCCGAGTTGAGCACGCGCGATGCTTTGAGCGCGCAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCCCACACCTCACCACAGCAACGCGAAGCTTTGAACCTCTCCGACTCACCACCGAATCTGAATCTGAGCCACATTAAACGCGAACGTGAACGTGATCCAACACCTGAGCCGACGGATCATGAGGATGCACCGCATCAACCGCCACCAGCTAAACGTGTTGGTAGCGGTCTGATGCCACCTGGTTTTCCTGCAAACTTTTACTTGAGTCCACACAACATGGCCGCTGTGGCAGCCATtacccatcatcatcatcatcagcagcaacaacaggatgCAGCGTCCGAAGGTGAACCGGAGGATGATTATGGAAATGCAGAGCACAATACTACAGGCAATTCGTCGTCTATGAACGATGACAATGAGCCACAGCAGCTAAATGGACATcatcaccaccaccaccatcatcatcatcagaatCATCTGGACAAATCGGATGATTCGGCTATTGAAAATTCACCCAGCACTTCCACAACGGCATCCGCATCCGGCGGACATCGTCACAGCTCGCCGGTGTccacaaaaaagaagaacgTCAGCAGTAAAGCACAGTCGAGTCCCAAGGATGCACAGGACGAAAGTTGCACCGTCAATGGCGGCGGCAAGTTAAATCCCCTCGAGACACTCAGTCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGAACCGGTGCAAATGGAGAGCAGCAGTTGATTGTCAACCTGGAGCTGAATGGCATTAAGTACTCGGGTGTCCTGGTTGCAAATGCGGCCAGAACAGACCAGAGAGCCGAGGACTCCGACACGGTAAATGCTGATACCAAGTCCGAGGAGCCAACGTCTGAGGAGGCTAGCAATGCGGTCAAGCACGATAATAGCCAGGAAATCAGCCAGAACGAGGCAATCGACGAGGAAACGGAGCAGCTCACGGATGACATTGTCAATGGAGTGGGCGGTGATGGCAATGGGGGGGCTGTGGGCGTAACCATGCATAAAGATGCTGTGGTCAGTTCGTAA
- Protein Sequence
- MVARPSVADFFARVTAGNSTLETSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGISGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHNSVVAAAAAASFGPVPPASNGASYNGATSGGTTVAAGGVAAANNNGAGGGGGTGGGGGGGVAGAGGGNSNNNNNNNNNAVTGNNNNNNNGHPFSFASPTAPSAKEARHFTANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQSAGPVLGATHPHQQQQQQQQSLHHHQQQQQQLQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPNLNLSHIKRERERDPTPEPTDHEDAPHQPPPAKRVGSGLMPPGFPANFYLSPHNMAAVAAITHHHHHQQQQQDAASEGEPEDDYGNAEHNTTGNSSSMNDDNEPQQLNGHHHHHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKNVSSKAQSSPKDAQDESCTVNGGGKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVANAARTDQRAEDSDTVNADTKSEEPTSEEASNAVKHDNSQEISQNEAIDEETEQLTDDIVNGVGGDGNGGAVGVTMHKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- iTF_00533582;
- 80% Identity
- -