Basic Information

Insect: Drosophila nasuta
Gene Symbol: retn
Assembly: GCA_017165715.1
Location: Scf:78616-109029[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 3e-26 6.8e-23 80.5 0.0 2 89 332 417 331 417 0.96

2 2 0.6 1.3e+03 -0.6 0.5 5 47 574 619 553 631 0.65

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	3e-26	6.8e-23	80.5	0.0	2	89	332	417	331	417	0.96
2	2	0.6	1.3e+03	-0.6	0.5	5	47	574	619	553	631	0.65

Sequence Information

Coding Sequence: ATGCAACTTCGAGTGCATCCGACTATGGACTGTAGCGGCCGTTCAACCAACAATATTGAACGTGATTCCGATTTGGGTGACGATTTGTCCCACGGCGATCGAACCGATGACGAAATGCGCGACTGCGATTCCGTTGACGGTGAGCATCATCAGCTGAGCGCCAAAGCGGCAATTGCCGCCCGGCTCAGTCACACAGTTGCCGGCGGTGCTGGCCTCAATTTCGCCAGTCCCGAGCAGCAAACAGATCTGCCACTCAGCCATCATCATCAGCTGCCCCCGAATCATCCGCTCAATGCTCTGGGCAGCTTCATGGGCATCAGTGGACTACACAGCATTCCAAATCTACAGCACAGCGATGTTCTCGAGAAGCTCAAGATGCAAGTGCGTGATATGAAAGTCGGTCTCATGGAGCAGGACTACGCAGCGGCGGCACATGCAGCAGCCTTTGGTGCCAACATGTTGCCCACAACCATCGGCTCGGCCTTTCCGATGCCCCACAACTCGGTGGCCGCAGCTGCGGCAGCTGCATCGTTTGGGCCCGTGCCGCCCGCCAGCAATGGCGCCACATACAACGGAGTCGCCACCGGTGGAGGGCCAGGAGCAGCTGCGGCTGCTGCGGCCGCTGCTGCAGTTATGGCTGCCAATACGGTCAATAATAATAATAATAATAATGGTGGCAATAGTGGAGCAGGTGGTGGAGGAACTGGAGCAGGAGGAGGCGGAGGAGGAGGAGGAGGGAACAGTAACAACAACAGCAATGCTGTCAGTGGCAACAACAACAACAACAACAGCAGCAACAACAACAACAACAACAATGGTCATCCATTTTCATTTGCATCGCCAACAGCGCCAAGCGCCAAAGAAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCGAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAACGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGCGGCACGCCAATCAATCGGCTGCCCATAATGGCCAAATCGGTGCTGGATCTATATGAGCTATACAATTTGGTGATTGCTCGCGGCGGCCTTGTCGATGTGATCAACAAGAAGCTATGGCAGGAGATCATCAAGGGACTGCATCTGCCATCGAGCATCACCAGCGCTGCGTTCACACTGCGCACCCAATACATGAAGTATCTCTACCCATACGAGTGCGAAAAGAAGAACCTCAGCACCCCAGCCGAACTCCAGGCAGCCATCGATGGCAATCGCCGCGAAGGACGCCGTTCCAGCTACGGCCAATATGAGGCCATGCACAATCAGATGCCACTTACGCCCATTTCACGCCCATCACTGCCGGGTGGCATGCAACAAATGTCGCCACTGGCGCTGGTCACACACGCGGCAGCAGCCAACAATCAGCAAGCAGCTGCCGCGGCAGCAGCCGCGCATCGACGATTGATGGGCGGTCCGGCATTTGGCCAAATGCCCAATCTGGTGACACAGGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTCATACAGGCCAAGAAGGAGCAGAGTGCTGGTCCCGTGCTTGGCGCCACACATCCCCACCAGCAACAGCAGCAGCAACAGCAACAACAACAACAGCAGCAGCAACAGCAATCGCTGCACCATCACCAGCAGCAACAACAGCTGCAGCAGCAGCAGCAACAACAACACCAGCAGCGACAACGCTCGCAGAGTCCCGAGCTGAGTACGCGCGATGCGTTGAGTGCTCAGGTGGCGCTTTGGCACATGTATCACAACAGCAGTCCGAATGGTTCGGCACACACCTCACCACAGCAGCGCGAAGCGCTGAACCTCTCCGACTCGCCACCGAATCTCAATCTCAGCCACATTAAACGCGAACGTGAACGTGATCCCACACCTGAGCCAGCGGATCATGAGGATGCCACACATCAGCCGCCGCCAGCCAAACGTGTGAGCAGCGGGCTTATGCCACCCGGTTTTCCTGCTAACTTCTACTTGAATCCACACAACATGGCTGCTGTGGCTGCCATGACCCAGCATCATCATCATCAACAGCAGCAGCAGCAACAGGATGCCGCATCCGAGGGCGAGCCAGAGGATGACTATGGCAATGCGGAGCACAATACCACGGGCAATTCGTCGTCGATGCACGATGACATTGAGCCACAGCAACTGAACGGACATCATCATCACCATCATCATCATCAGCTGCATCATCTGGACAAATCGGATGATTCGGCCATTGAGAATTCACCCAGCACTTCAACAACAGCATCCGCCTCGGGCGGCCATCGCCACAGCTCGCCGGTGTCCACCAAAAAGAAGTGTGCCAGCAGTAAGACGCAGTCCGGTGGCAAGGATGCCGAGCACGAGCACAACAATTGCACTGTGAACGGTGGCGTTGCCAAGCTAAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACTGGCGCCAATGGTGAGCAGCAGTTGATTGTCAACCTGGAGCTAAATGGCATTAAGTACTCGGGTGTGCTGGTGTCCAATGCAACCAGAGTGGAACCCAGAGTCGACGACTCGGACACGCTAAATGCGGCTGCTGCTGATGCCACGTCCGAGGAGCCGACGGTCGAAGAGGCTGGCAATGCGGTCAAGCATGAGAATAGCCAAGAAGTCAACCAGAACGATGCGGTTGACGAGGACGAGGAAACGGACGAGCAGCCCACGGATGACATTGTAAACGGAATGGGAGTGGGAGTGGGCGTGGGCGTTGGTGGTGGTGTTAGTGGCTCTGTGGGCGTGTCTGTGCTTAAAGATGCTGTGGTCAGTTCGTAG
Protein Sequence: MQLRVHPTMDCSGRSTNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGISGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTIGSAFPMPHNSVAAAAAAASFGPVPPASNGATYNGVATGGGPGAAAAAAAAAAVMAANTVNNNNNNNGGNSGAGGGGTGAGGGGGGGGGNSNNNSNAVSGNNNNNNSSNNNNNNNGHPFSFASPTAPSAKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAAANNQQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQSAGPVLGATHPHQQQQQQQQQQQQQQQQQSLHHHQQQQQLQQQQQQQHQQRQRSQSPELSTRDALSAQVALWHMYHNSSPNGSAHTSPQQREALNLSDSPPNLNLSHIKRERERDPTPEPADHEDATHQPPPAKRVSSGLMPPGFPANFYLNPHNMAAVAAMTQHHHHQQQQQQQDAASEGEPEDDYGNAEHNTTGNSSSMHDDIEPQQLNGHHHHHHHHQLHHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKCASSKTQSGGKDAEHEHNNCTVNGGVAKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVSNATRVEPRVDDSDTLNAAAADATSEEPTVEEAGNAVKHENSQEVNQNDAVDEDEETDEQPTDDIVNGMGVGVGVGVGGGVSGSVGVSVLKDAVVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00502302;
90% Identity: iTF_00472145; iTF_00562251;
80% Identity: -