Dpar002586.1
Basic Information
- Insect
- Drosophila parthenogenetica
- Gene Symbol
- retn
- Assembly
- GCA_035047505.1
- Location
- JAWNPM010000080.1:4800127-4823575[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-26 1e-22 80.5 0.0 2 89 319 404 318 404 0.96 2 2 1.8 4e+03 -1.6 0.4 9 40 560 595 537 610 0.58
Sequence Information
- Coding Sequence
- ATGCAACTTCGAGTGCATCCGACTATGGATTGTAGCGGCCGTTCAAATAACACTATTGAACGCGATTCCGATTTGGGTGACGATTTGTCCCACGGCGATCGAACGGATGACGAGATGAGGGACTGTGATTCGGTGGACGGTGAGCATCATCAGCTGAGCGCAAAGGCTGCGATTGCAGCTCGTCTTAGCCACACAGTCGCCGGCGGAGCTGGCCTCAATTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcagctgCCGCCGAATCATCCGCTAAATGCTCTGGGCAGCTTCATGGGCATCAGTGGACTACACAGCATTCCAAATCTACAGCACAGCGATGTCCTTGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTTGGTCTCATGGAACAGGActatgcagcagcagcacatgCGGCTGCCTTTGGAGCCAATATGTTGCCCACAACGATCAGTTCCGCCTTTCCCCTGCCACACAATtcggtggcagcagcagcagcggcggcggcagcggccTCCTTTGGCCCTGTGCCACCAGCGAGCAATGGCGGCGCTTACAATGGTGCCACAAGTGGAGGCAACAATGCAACAGGAGCAGCTGTGGCAGGTAATAACAGCGCTGTAGGAGGAGCAGCTGGCGGAGGGGCAGGAGCTGGCGGAGGAGGCGGTGGAGGTGGCTTAAATGCAGCTGGAGCAGCCAACAATTCAGtgagtggcaacaacaacagcagcagcaacaacaacaacaacaacaatggtcaTCCCTTCTCATTTGCATCGCCCACAGCGCCAAGCGCCAAAGAAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTTAGACAGCTGTATGAAATCAATGATGATCCGAAGCGCAAGGAGTTTCTCGatgatttgttttcatttatgcAAAAGCGCGGCACGCCCATCAATCGGCTGCCCATAATGGCTAAATCGGTGCTGGATCTATATGAGCTATACAATTTGGTAATAGCACGCGGCGGCCTGGTCGAtgtaatcaataaaaaattgtggcAGGAGATCATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCCGCATTCACGCTGCGCACACAATACATGAAGTATCTTTACCCATACGAGTGCGAAAAGAAGAATCTCAGCACACCGGCTGAACTGCAGGCGGCCATCGATGGCAATCGCCGTGAAGGACGTCGCTCCAGCTATGGCCAATACGAGGCCATGCACAATCAGATGCCGCTGACGCCCATTTCACGGCCTACACTGCCgggtggcatgcaacaaatgtCGCCATTGGCGCTGGTCACACATGCCGCGGCAGCCAACAATCAACAGgcgcaagcagcagcagcagccgcggCAGCGCATCGACGTTTGATGGGTGGACcggcttttggccaaatgccCAACCTGATGACGCAGGAGATTGAGAATCGTATGATGGAGTATCTGCAGCTAATACAGGCCAAGAAGGAGCAGAATGCTGGCCCAGTGCTTGGTGCTGCACATCcccatcagcagcagcaacaacaacaacagcagcaacagtcgctGCACCatcaccagcaacagcaacagcagcaacaacaacagcagcagatgcagcagcaacgtcaGCGTTCGCAGAGTCCAGAGCTGAGCACGCGCGATGCGTTGAGTGCACAGGTGGCGCTGTGGCACATGTACCACAACAGCAGTCCCACTGGCTCGGCACACACCTCACCCCAGCAACGCGAAGCTTTGAACCTTTCGGACTCGCCTCCGAATCTGAATTTGAGTCACATTAAGCGCGAACGTGAACGGGACCCCACACCAGAGCCAGCGGATCATGAGGATGCACCACATCAACCGCCGCCAGCTAAACGTGTTGGCAGCGGCCTGATGCCACCTGGTTTTCCCGCTAACTTCTACTTGAATCCACACAACATGGCCGCTGTGGCAGCCATTACCCAGCAccatcatcaccatcagcagcaacagcagcagcaacaggacgCAGCGTCCGAGGGTGAACCGGAGGATGATTATGGCAATGCGGAGCACAATACCACAGGCAACTCGTCGTCCATGAACGATGACAATGAGCCACAGCAGCTGAATGGAcatcaccaccaccatcaccatcatcatcataatcagAATCATCTAGACAAATCGGATGATTCAGCTATTGAGAACTCACCCAGCACTTCCACAACGGCCTCCGCATCCGGTGGCAATCGTCACAGCTCGCCAGTGTCCACCAAGAAGAAGAATGGCAGCAGTAAAGGACAATCGAGTTCCAaggaggcaacagcagcacacgACCATACCAacggtggtgctggtggtggtggtggtggtggtggtgtcaAGCTAAATCCCCTCGAGACACTCAGTCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCAGTGCGAATGGTGAGCAGCAGTTGATTGTCAACCTGGAGCTAAATGGCATTAAGTACTCCGGTGTTCTGGTGGCCAATGCAGTTGCACTCGCCAACGCTGCCGCCGCGGCCGCAGCCGAGTCAAGGGACGAGGCGAACGATGAGGCAAATGCCGAGGCCGACGACGATGCCGATGACGACAACGATGGCGATGCCAGAGACGAGGAGCACGCGTCAGAGGAGGTCAAGCATGATAAAAGCATGGAAGTCAATAGTCAGAACGAGACAGCTGATGAGGAGGCGGAGCAGACCAGCGAGGACAACATTGTGAATGGGGTGGCGACTGTGGGCGTAACCCAGCTTAAAGATGCTGTGGTCAGTTCGTAA
- Protein Sequence
- MQLRVHPTMDCSGRSNNTIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGISGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHNSVAAAAAAAAAASFGPVPPASNGGAYNGATSGGNNATGAAVAGNNSAVGGAAGGGAGAGGGGGGGGLNAAGAANNSVSGNNNSSSNNNNNNNGHPFSFASPTAPSAKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPTLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLMTQEIENRMMEYLQLIQAKKEQNAGPVLGAAHPHQQQQQQQQQQQSLHHHQQQQQQQQQQQQMQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPNLNLSHIKRERERDPTPEPADHEDAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAITQHHHHHQQQQQQQQDAASEGEPEDDYGNAEHNTTGNSSSMNDDNEPQQLNGHHHHHHHHHHNQNHLDKSDDSAIENSPSTSTTASASGGNRHSSPVSTKKKNGSSKGQSSSKEATAAHDHTNGGAGGGGGGGGVKLNPLETLSLLSGMQFQVARNGTSANGEQQLIVNLELNGIKYSGVLVANAVALANAAAAAAAESRDEANDEANAEADDDADDDNDGDARDEEHASEEVKHDKSMEVNSQNETADEEAEQTSEDNIVNGVATVGVTQLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- iTF_00470646;
- 80% Identity
- -