Dalb007397.1
Basic Information
- Insect
- Drosophila albomicans
- Gene Symbol
- retn
- Assembly
- GCA_009650485.1
- Location
- NC:40539965-40570528[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-26 6.7e-23 80.5 0.0 2 89 329 414 328 414 0.96 2 2 0.7 1.3e+03 -0.6 0.5 5 47 571 616 550 628 0.65
Sequence Information
- Coding Sequence
- ATGCAACTTCGAGTGCATCCGACTATGGACTGTAGCGGCCGTTCAACCAACAATATTGAACGCGATTCCGATTTGGGTGACGATTTgTCCCACGGCGATCGAACCGATGACGAAATGCGCGACTGCGATTCCGTTGACGGTGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCCGCCCGGCTCAGTCACACAGTTGCCGGCGGTGCTGGCCTCAATTTCGCCAGTCCCGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcagctgccCCCGAATCATCCGCTCAATGCTCTGGGCAGCTTCATGGGCATCAGCGGACTACACAGCATTCCAAATCTACAGCACAGCGATGTTCTCGAGAAGCTCAAGATGCAAGTGCGTGATATGAAAGTCGGTCTCATGGAGCAGGACTACGCAGCGGCGGCACATGCAGCAGCCTTTGGTGCCAACATGTTGCCCACAACCATCGGCTCGGCCTTTCCGATGCCCCACAACTCGGTGGCCgcagctgcggcagctgcaTCCTTTGGGCCCGTGCCGCCCGCCAGCAATGGCGCCACATACAACGGAGTCGCCACCGGTGGAGGGCCAGGAGCAGCTGCGGCTgccgcggctgctgctgcagttatGGCTGCCAATACggtcaataataataataatggtagCAATAGTGGAGCAGGTGGTGGAGGAACTGGAgcaggaggaggcggaggaggaggaggagggaacagtaacaacaacagcaatgctgtcagtggcaacaacaacaacaacaacagcagcagcaacaacaacaacaatggtcatccattttcatttgcatcgCCAACAGCGCCAAGCGCCAAAGAAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCGAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAACGATGATCCCAAGCGCAAGGAGTTTCTCGATgatttgttttcgtttatGCAAAAGCGCGGCACGCCAATCAATCGGCTGCCCATAATGGCCAAATCGGTGCTGGATCTATATGAGCTATACAATTTGGTGATTGCTCGCGGCGGCCTTGTCGATGTGATCAACAAGAAGCTATGGCAGGAGATCATCAAGGGACTGCATCTGCCATCGAGCATCACCAGCGCTGCGTTCACACTACGCACCCAATACATGAAGTATCTCTACCCATACGAGTGCGAAAAGAAGAACCTCAGCACCCCAGCCGAACTCCAGGCAGCCATCGATGGCAATCGCCGCGAAGGACGCCGTTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCACTTACGCCCATTTCACGCCCATCACTGCCGggtggcatgcaacaaatgTCGCCACTGGCGTTGGTCACACACGCGGCAGCAGCCAACAATCAGCAAGCAGCTGCCGCGGCAGCAGCCGCGCATCGACGATTGATGGGCGGTCCGGCATTTGGCCAAATGCCCAATCTGGTGACACAGGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTCATACAGGCCAAGAAGGAGCAGAGTGCTGGTCCCGTGCTTGGCGCCACACATCcccaccagcaacagcagcagcaacagcaacaacaacaacagcagcagcaacagcaatcgctgcaccatcaccagcagcaacaacagctgcagcagcagcaacaacaacaacaccagcagcgaCAACGCTCGCAGAGTCCCGAGCTGAGCACGCGCGATGCGTTGAGTGCTCAGGTGGCGCTTTGGCACATGTATCACAACAGCAGTCCGAATGGTTCGGCACACACCTCACCACAGCAGCGCGAAGCGCTGAACCTCTCCGACTCGCCACCGAATCTCAATCTCAGCCACATTAAACGCGAACGTGAACGTGATCCCACACCTGAGCCAGCGGATCATGAGGATGCCGCACATCAGCCGCCGCCAGCCAAACGTGTGAGCAGCGGCCTTATGCCACCCGGTTTTCCTGCTAACTTCTACTTGAATCCACACAACatggctgctgtggctgccatgacccagcatcatcatcatcaacagcagcagcagcaacaggatgCCGCATCCGAGGGCGAGCCAGAGGATGACTATGGCAATGCGGAGCACAATACCACGGGCAATTCGTCGTCGATGCACGATGACATTGAGCCACAGCAACTGAACggacatcatcatcaccatcatcatcatcagctgcaTCATCTGGACAAATCGGATGATTCGGCCATTGAGAATTCACCCAGCACTTCAACAACGGCATCCGCCTCGGGCGGCCATCGCCACAGCTCGCCGGTGTCCACCAAAAAGAAGTGTGCCAGCAGTAAGACGCAGTCCGGTGGCAAGGATGCCGAGCACGAGCACAACAATTGCACTGTGAACGGTGGCGTTGCCAAGCTAAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACTGGCGCCAATGGTGAACAGCAGTTGATTGTCAACCTGGAGCTAAATGGCATTAAGTACTCGGGTGTGCTGGTGTCCAATGCAACCCGAGTGGAACCCAGAGTCGACGACTCGGACACGCTaaatgcggctgctgctgatgccacGTCCGAGGAGCCGACGGTCGAAGAGGCTGGCAATGCGGTCAAGCATGAGAATAGCCAAGAAGACAACCAGAACGATGCGGTTGACGAGGACGAGGAAACGGACGAGCAGCCCACGGATGACATTGTAAACGGAatgggagtgggagtgggcgtgggcatgggcgtgggcgtgggcgttGGTGGTGGTGTTAGTGGCTCTGTGGGCGTGTCTGTGCTTAAAGATGCTGTGGTCAGTTCGTAG
- Protein Sequence
- MQLRVHPTMDCSGRSTNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGISGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTIGSAFPMPHNSVAAAAAAASFGPVPPASNGATYNGVATGGGPGAAAAAAAAAAVMAANTVNNNNNGSNSGAGGGGTGAGGGGGGGGGNSNNNSNAVSGNNNNNNSSSNNNNNGHPFSFASPTAPSAKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAAANNQQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQSAGPVLGATHPHQQQQQQQQQQQQQQQQQSLHHHQQQQQLQQQQQQQHQQRQRSQSPELSTRDALSAQVALWHMYHNSSPNGSAHTSPQQREALNLSDSPPNLNLSHIKRERERDPTPEPADHEDAAHQPPPAKRVSSGLMPPGFPANFYLNPHNMAAVAAMTQHHHHQQQQQQQDAASEGEPEDDYGNAEHNTTGNSSSMHDDIEPQQLNGHHHHHHHHQLHHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKCASSKTQSGGKDAEHEHNNCTVNGGVAKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVSNATRVEPRVDDSDTLNAAAADATSEEPTVEEAGNAVKHENSQEDNQNDAVDEDEETDEQPTDDIVNGMGVGVGVGMGVGVGVGGGVSGSVGVSVLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- iTF_00553537;
- 80% Identity
- -