Dbuz007569.1
Basic Information
- Insect
- Drosophila buzzatii
- Gene Symbol
- retn
- Assembly
- GCA_035045845.1
- Location
- JAWNOS010000244.1:12761432-12779405[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-26 1.1e-22 80.5 0.0 2 89 277 362 276 362 0.96 2 2 1.1 2.2e+03 -0.7 0.6 7 47 514 560 493 572 0.66
Sequence Information
- Coding Sequence
- ATGCGCGACTGCGACTCTGTAGACGGTGAACACCATCAGCTGAGCGCCAAGGCTGCAATTGCAGCGCGACTCAGTCACACAGTCGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGCCATCATCATCAACTGCCGCCAAATCATCCGCTCAATGCTCTGGGCAGCTTCATGGGCATCGGCGGACTACACAGCATTCCAAATCTGCAGCACAGCGATGTGCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTGGGTCTCATGGAGCAGGACTATGCGGCGGCGGCACATGCAGCTGCCTTTGGGGCCAATATGCTGCCCACGACGATTAGCTCGGCCTTTCCGCTGGCCCACAATTCAgtggcagccgctgctgcagctgcatcctTTGGGCATGCGGCCAATGCGGCGGCCAGCAATGGCGCCAGTTACAATGGaggcgctgcagcagccggTGGAGCAGGAGGAGCCGTAGCAGCTGGCAACAATAATGCAGGTGGCACAGGTGGAGGCACGGCCAATGcaactggcaacaacaacagcaacaataacaacaacaacaacaataacaatagcagcaacaacaacaataacaatgccGGCAATGGTCATCCCTTTTCGTTTGCATCGCCGACAGCGCCAAGCGCCAAAGAAGCGCGTCATTTTGCAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGCGGTACACCTATCAATCGGCTGCCCATAATGGCTAAATCGGTGCTGGATCTGtatgaattatataatctGGTTATAGCACGCGGCGGCCTGGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATTTGCCATCGAGCATCACCAGTGCCGCATTCACGCTGCGCACACAATACATGAAGTATTTGTACCCATACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCCGAGCTGCAGGCGGCCATCGATGGCAATCGGCGCGAAGGACGTCGCTCCAGCTATGGCCAATACGAAGCAATGCACAATCAGATGCCGCTGACACCCATTTCGCGACCTCCGCTGCCTGGCGGCATGCAACAGATGTCGCCCTTGGCTCTGGTCACACACGCCGCGGCGGCCAACAATCAGCAGGcgcaggcagcggcagcagccgctgcagcgcACCGCCGACTGATGGGCGGACCGGCGTTTGGCCAGATGCCGAATCTGATGACGCAGGAGATTGAGAATCGCATGATGGAATATCTGCAGTTAATCCAGGCCAAGAAGGAGCAGAATGCTGGCCCCGTGCTCGCAGCCACACACaatcatcaacagcagcagcaacagcagcagcaacaacagcagcaacagcaacaacagcagcagcaacaatcgctgcatcatcaccagcagcagcaacagcagcgtcaGCGCTCCCAGAGCCCAGAGCTGAGCACGCGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCACATGTATCACAATAGCAGTCCGAACGGTTCGGCGCACACCTCACCACAGCAGCGCGAAGCTTTGAACCTATCCGATTCGCCGCCAACTCTGAATTTGAATCACATAAAACGTGAACGTGAACGCGATCCAACGCCGGAGCCAGCGGATCAGGATGAGGCACCGCACCAGCCACCACCAGCGAAACGTGTGGGCAGCGGCCTGATGCCACCCGGTTTTCCCGCTAACTTCTATTTGAATCCACACAATATGGCCgctgtggcagctgccgcCGGCTTCCATCACCAGGCGAACAGCAATAGCCATCATCatctgcatcagcagcagcagcaacagttgcagctgcagcaacaggaCGCCGCGTCCGATGGCGAGCCAGAGGATGACTATGGCAATGCTGAGCACAATACCACCGGCAATTCCTCGTCCTTGCACGATGACAGCgagccgcagcagctgaacGGTCATCATGAGCATCTCgaccatcatcaccaccatcatcatcatcatcagaaTCATCTGGACAAGTCAGATGATTCGGCCATTGAGAACTCACCCAGCACTTCCACTACTGCATCAGCGTCGGGCGGTCATCGCCACAGCTCGCCGGTCTccacgaagaagaagagcgcAACTGGCAAGGCACAGTCCAGTTCCAAGGACACGCAACACGACAGCTGCACAGCCGGcacaggcggcagcaacagcagcagcagcaacaaaggcatcggcggcggcggcggcgggaACGGAATCGGCGGTGACGTCAAGCTAAATCCTCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCGCAAATGGCGAGCAGCAGTTGATTGTCAATCTGGCGCTGAATGGCATTAAGTACTCGGGCGTGCTGGTGGCCAATGCGGGCGGACTCGAGCGtcacaacgacgacgacgacggcgacgctgacgacgatgatgatgacgacgtcGCCGACGCCAACAGCGACGTCAACAGCAACCCCAATACAGACAACAAGATTGCTGCAATTGCGGCGCCCGCTGCAGTCATAGAAGGAGGCGGCGCCAGCGAGGAGCCAGCGCCTGAGGTGGCCCACGAGAGCGGCCAGCAAGTTGGCCAGAATGAGGCAAACGACGAGGAAGAGGCGCAGCCAACTGAAGACATTCTCAATGGCGGCCTGGGTGGGGGCGTGGGCGTAGGTTtaggtgtgggtgtgggtgtgggtgtgggcgtggctgtgggcTCGCTGTTAAAAGATGCTGTAGTAAATTCGTAG
- Protein Sequence
- MRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLAHNSVAAAAAAASFGHAANAAASNGASYNGGAAAAGGAGGAVAAGNNNAGGTGGGTANATGNNNSNNNNNNNNNNSSNNNNNNAGNGHPFSFASPTAPSAKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLMTQEIENRMMEYLQLIQAKKEQNAGPVLAATHNHQQQQQQQQQQQQQQQQQQQQQSLHHHQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPNGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPADQDEAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSNSHHHLHQQQQQQLQLQQQDAASDGEPEDDYGNAEHNTTGNSSSLHDDSEPQQLNGHHEHLDHHHHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSATGKAQSSSKDTQHDSCTAGTGGSNSSSSNKGIGGGGGGNGIGGDVKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLALNGIKYSGVLVANAGGLERHNDDDDGDADDDDDDDVADANSDVNSNPNTDNKIAAIAAPAAVIEGGGASEEPAPEVAHESGQQVGQNEANDEEEAQPTEDILNGGLGGGVGVGLGVGVGVGVGVAVGSLLKDAVVNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- iTF_00599362;
- 80% Identity
- -