Dpeg003224.1
Basic Information
- Insect
- Drosophila pegasa
- Gene Symbol
- retn
- Assembly
- GCA_035046225.1
- Location
- JAWNOD010000076.1:12976359-13005696[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-26 8.4e-23 80.5 0.0 2 89 298 383 297 383 0.96 2 2 1.4 2.5e+03 -1.2 0.2 8 42 533 575 487 588 0.64
Sequence Information
- Coding Sequence
- ATGGATTGCAGCGGCCGTTCAAATAACAATATTGAACGCGATTCCGATTTGGGCGACGATTTGTCCCACGGCGATCGAACGGATGACGAGATGCGCGACTGCGACTCCGTAGACGGCGAGCACCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCGCGCCTCAGTCACACAGTCGCCGGCGGCGCTGGCCTCAACTTTGCCAGCCCCGAGCAGCAAACAGATCTGCCACtcagCCATCATCACCAACTGCCGCCAAATCATCCGCTTAACGCTCTCGGCAGCTTCATGGGCATCGGCGGACTACACAGCATTCCAAATCTGCAGCACAGCGATGTGCTCGAGAAGCTCAAGATGCAGGTGCGCGACATGAAAGTGGGACTCATGGAACAGGACTATGCGGCGGCGGCACATGCAGCTGCCTTTGGGGCCAACATGCTGCCCACGACGATCAGCTCGGCCTTTCCGCTGGCCCACAATTCGGTGGCCGccgcggcggcagctgcatcCTTTGGCCATGCGGCCAATGCCACGGCCAGCAATGGCGCCAGCTACAATGGAGGCGCCGCAGCGGCCAGCGCTggagctgcggcagctggcaACGGCAGTGCAGGCGGCACAGGTGGCGCGGCCAATGCAACAGCCTctgctggcaacaacaacaacaacaatagcagcagtggcaacaacagcggcaacagcggcaatGCTGGCAATGGACATCCCTTTTCGTTCGCATCGCCGACAGCGCCGAGCGCCAAAGAAGCTAATTCCGCATCGAACTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATgatttgttttcgtttatgCAAAAGCGTGGCACACCCATCAATCGGCTGCCCATCATGGCCAAATCGGTGCTGGATCTGTATGAACTGTACAATCTGGTGATAGCGCGCGGCGGCCTCGTCGACGTTATCAACAAGAAGCTCTGGCAGGAGATCATCAAGGGACTGCACCTGCCCTCCAGCATCACCAGCGCCGCCTTCACGCTGCGCACACAATACATGAAGTATTTGTACCCGTACGAGTGCGAGAAGAAGAACCTGAGCACCCCGGCCGAGCTGCAGGCGGCCATCGATGGCAACCGGCGCGAAGGACGTCGCTCCAGCTACGGCCAGTACGAGGCGATGCACAATCAGATGCCAATGACGCCCATTTCGCGCGCTCCGCTGCCCGGCGGCATGCAGCAGATGTCGCCGCTGGCGCTGGTCACGCACGCCGCGGCGGCCAACAATCAGCAGGCGCAGgcagcggccgccgccgccgcagcgcaCCGCCGACTGATGGGCGGCCCGGCGTTCGGCCAGATGCCCAGCCTGGTGACGCAGGAGATCGAGAACCGCATGATGGAGTATCTGCAGCTGATACAGGCCAAGAAGGAGCAGAGCGCCGGGCCCGTCTTGACGGCCACACAcaatcaccagcagcagcagcaggcgcagcagcagcagcatcaacagcagcagcagcagcagtcgctgcatcatcaccagcagcagcagcagcagcagcggcagcagcgctcgCCCAGCCCCGAGCTGAGCACGCGCGACGCGCTGAGTGCACAGGTGGCGCTGTGGCACATGTACCACAACAGCAGCCCGAGCGGCTCGGCGCACACCTCGCCGCAGCAGCGTGAGGCCCTGAACCTGTCGGATTCGCCGCCGACGCTGAATCTGAATCACATCAAGCGGGAGCGCGAGCGCGATCCGACGCCGGAGCCGACGGATGCGGACGAGGCGCCGCACCAGCCGCCGCCGGCGAAGCGCGTGGGCAGCGGCCTGATGCCGCCCGGCTTCCCCGCCAACTTCTACTTGAATCCACACAACATGGCCGCggtggccgccgccgccggcttCCATCACCAGGCGAACAGCGGCAGCCACCACCATCAGCACcatctgcagcaacagcagctgcagctgcagctgcagcagcagcaggacgccGCGTCCGACGGCGAGCCGGAGGATGACTATGGCAACGCGGAGCACAACACCACCGGCAACTCCTCGTCCATGCACGATGACAgcgagccgcagcagctgaacgGGCACCACGAGCacctgcaccaccaccaccaccacgacgaccaccaccaccatcagAATCATCTGGACAAGTCGGACGACTCGGCCATCGAGAACTCGCCCAGCACCTCCACGACGGCGTCCGCCTCGGGCGGCCATCGGCACAGCTCGCCGGTGTCCACCAAGAAGAAGGCGCAGTCCAGTCCCAAGGACACGCAGCACGACAGCGGCACAGCGGGCAGCAGTGGTGCAGTTGggagcggcggcggtggtggcatcggcggcggcgtcaaGCTGAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCGCGAacggcgagcagcagctgatggtCAATCTGGAGCTGAATGGCATCAAGTACTCGGGCGTGCTGGTGGCCAATGCGGCCACCGGGGGGGCGCTGGGGCGTCGCGCGGCGCCCCAGCCGGACAGCGATGCAGTGACGCCCGAGGGCGGCGAGGAGCCGGCGCCCGAAGAGGCCAACAatgcagcggcaacggcgacggcggcacaCGAGAGCAGCCAGAATGAGGCaaacgaggaggaggaggaagaggagcagcagcagcagcagcaggaggaggagcaggaggcacacaagcagctgcagccatgCGCTACTGAAGACATTGTCAATGGCGGCAGtggggctgggggcgtgggcgtgggtcTAGGTGTGGGTGTGGTCGTGGGGTCGCTGCTGAAGGATGCCGTAGCCAGTTCGTAG
- Protein Sequence
- MDCSGRSNNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLAHNSVAAAAAAASFGHAANATASNGASYNGGAAAASAGAAAAGNGSAGGTGGAANATASAGNNNNNNSSSGNNSGNSGNAGNGHPFSFASPTAPSAKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPMTPISRAPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPSLVTQEIENRMMEYLQLIQAKKEQSAGPVLTATHNHQQQQQAQQQQHQQQQQQQSLHHHQQQQQQQRQQRSPSPELSTRDALSAQVALWHMYHNSSPSGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDADEAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSGSHHHQHHLQQQQLQLQLQQQQDAASDGEPEDDYGNAEHNTTGNSSSMHDDSEPQQLNGHHEHLHHHHHHDDHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKAQSSPKDTQHDSGTAGSSGAVGSGGGGGIGGGVKLNPLETLSLLSGMQFQVARNGTGANGEQQLMVNLELNGIKYSGVLVANAATGGALGRRAAPQPDSDAVTPEGGEEPAPEEANNAAATATAAHESSQNEANEEEEEEEQQQQQQEEEQEAHKQLQPCATEDIVNGGSGAGGVGVGLGVGVVVGSLLKDAVASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- -
- 80% Identity
- -