Basic Information

Insect: Drosophila putrida
Gene Symbol: retn
Assembly: GCA_037043535.1
Location: JBAMBI010000472.1:4141458-4168525[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 4.8e-26 8.7e-23 80.5 0.0 2 89 316 401 315 401 0.96

2 2 1.3 2.3e+03 -0.9 0.3 6 44 551 594 536 607 0.67

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	4.8e-26	8.7e-23	80.5	0.0	2	89	316	401	315	401	0.96
2	2	1.3	2.3e+03	-0.9	0.3	6	44	551	594	536	607	0.67

Sequence Information

Coding Sequence: ATGCAACTGCGAGTGCATCCGACTATGGATTGTAGCGGCCGTTCAAATAACAATATTGAACGTGATTCCGACTTGGGTGACGATTTGTCCCACGGCGATCGAACGGATGACGAGATGAGGGACTGCGATTCCGTGGACGGTGAACATCATCAGTTGAGCGCCAAGGCGGCAATTGCTGCTCGTCTCAGTCACACAGTTGCCGGCGGTGCTGGCCTTAATTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCActcagccatcatcatcagctgcCTCCGAATCATCCGCTCAATGCTCTTGGCAGCTTCATGGGCATCAGTGGACTACACAGCATTCCAAATCTACAGCACAGTGATGTTCTCGAGAAACTCAAGATGCAAGTGCGTGACATGAAAGTTGGTCTCATGGAACAGGActatgcagcagcagcacatgCGGCTGCCTTTGGAGCCAACATGTTGCCCACAACGATCAGCTCGGCCTTTCCCTTGCCACACAATTCGGTGGTGGCAGCTGCGGCCGCCGCATCCTTTGGCCCCGTGCCGCCTGCCAGCAATGGCGCCAGCTACAATGGTGCAACAAGTGGAGGCACCACTGTGGCAGCAGGAGGAGTGGcagctgccaacaacaataatggaGCTGGAGGAGGTGGTGgtgcaggaggaggaggaggtggaggagttgctggagcaggaggaggcaacagcaacaataacaacagcaatgcagtgactggcaacaacaacaacaatggtcaTCCCTTCTCATTTGCATCGCCGACAGCGCCAAGCGCCAAAGAAGCGCGCCACTTTACAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCTAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGATGATCCCAAGCGCAAAGAGTTTCTCGatgatttgttttcatttatgcaAAAGCGCGGCACGCCCATCAATCGCCTGCCCATAATGGCCAAATCGGTATTGGATCTTTATGAGCTATACAATTTGGTGATAGCACGCGGCGGCCTGGTCGATGTGATCAACAAGAAGCTATGGCAGGAGATCATCAAGGGATTGCATCTGCCATCGAGCATCACCAGTGCCGCATTCACACTACGCACCCAATACATGAAGTATCTCTACCCATACGAGTGCGAAAAGAAGAACCTCAGCACACCTGCCGAGCTGCAGGCGGCCATTGATGGCAATCGTCGTGAAGGACGTCGATCCAGCTATGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACGCCCATTTCACGCCCATCGTTGCCgggtggcatgcaacaaatgtCGCCACTGGCGCTGGTCACACACGCCGCGGCAGCCAACAATCAACAGgcacaggcagcagcagccgcggCCGCCGCACATCGTCGACTGATGGGTGGACCGGCTTTTGGCCAGATGCCCAATCTGATGACACAGGAGATTGAGAATCGGATGATGGAGTATCTGCAGCTAATACAGGCCAAGAAGGAGCAGAGTGCTGGGCCAGTGCTTGGCGCCACACATCcccatcagcaacaacagcagcagcagcaacagtcgctgcatcatcaccaacaacaacaacagcagcaactgcagcagcagcagcaacaacaacagcgacaacgcTCTCAAAGTCCCGAGTTGAGCACGCGCGATGCATTGAGCGCGCAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACTGGTTCGGCCCACACCTCACCACAGCAACGCGAAGCTTTGAACCTCTCCGACTCACCAccgaatctgaatctgagCCACATTAAACGCGAACGTGAACGTGATCCAACACCTGAGCCGACGGATCATGAGGATGCACCGCATCAACCGCCACCAGCTAAACGTGTTGGAAGCGGTCTGATGCCACCTGGTTTTCCTGCAAACTTTTACTTGAGTCCACACAACATGGCCGCTGTGGCCGCCATtacccatcatcatcatcatcagcagcaacaacaggacgCAGCGTCCGAGGGTGAACCGGAGGATGATTATGGAAATGCCGAGCACAATACTACAGGCAATTCGTCGTCTATGAACGATGACAATGAGCCACAGCAGCTGAATggacatcatcatcaccaccaccatcatcatcatcagaatCATCTGGACAAATCGGATGATTCGGCTATTGAGAATTCACCCAGCACTTCCACAACAGCATCCGCATCCGGTGGACATCGTCACAGCTCGCCGGtgtcaacaaaaaagaagaacgtCAGCAGTAAAGCACAGTCGAGTCCCAAGGATGCACAGGACGAAAGTTGCACCGTCAATGGCGGTGGCAAGTTAAATCCCCTCGAGACACTCAGTCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGTGCAAATGGAGAGCAGCAATTGATTGTCAACCTGGAGCTGAATGGCATTAAGTACTCGGGTGTTCTGGTTGCAAATGCGGCCAGAACAGACCAGAGAGCCGACACCGACTCCGATACGGTAAATGCTGATACCAAGTCCGAGGAGCCAGCGTCTGAGGAGACTAGCAATGCGGTCAAGCACGATAATAGCCAGGAAGTCAGCCAGAACGAGGCAATCGACGAGGAAACGGAGCAGCTCACGGATGACATTGTGAATGGAGTGGGTGGGGATGGAAATGTAGGGGCTGGGGCTGGGACTGGGGCTGTGGGCGTGACCATGCATAAAGATGCTGTGGTCAGTTCGTAA
Protein Sequence: MQLRVHPTMDCSGRSNNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGISGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHNSVVAAAAAASFGPVPPASNGASYNGATSGGTTVAAGGVAAANNNNGAGGGGGAGGGGGGGVAGAGGGNSNNNNSNAVTGNNNNNGHPFSFASPTAPSAKEARHFTANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLMTQEIENRMMEYLQLIQAKKEQSAGPVLGATHPHQQQQQQQQQSLHHHQQQQQQQLQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPNLNLSHIKRERERDPTPEPTDHEDAPHQPPPAKRVGSGLMPPGFPANFYLSPHNMAAVAAITHHHHHQQQQQDAASEGEPEDDYGNAEHNTTGNSSSMNDDNEPQQLNGHHHHHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKNVSSKAQSSPKDAQDESCTVNGGGKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVANAARTDQRADTDSDTVNADTKSEEPASEETSNAVKHDNSQEVSQNEAIDEETEQLTDDIVNGVGGDGNVGAGAGTGAVGVTMHKDAVVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00502302;
90% Identity: iTF_00533582;
80% Identity: -