Dtri013265.1
Basic Information
- Insect
- Drosophila tripunctata
- Gene Symbol
- retn
- Assembly
- GCA_035047385.1
- Location
- JAWNPS010000288.1:13435525-13455218[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-26 9e-23 80.5 0.0 2 89 299 384 298 384 0.96 2 2 1.9 3.3e+03 -1.4 0.3 7 41 535 576 518 590 0.58
Sequence Information
- Coding Sequence
- ATGCATAAAAAGGCAAAGACCGGACCAGCGATAGCAACAGTCAACAGTCCACAGTATAAGCGGTCCCACGGCGATCGAACGGATGACGAGATGAGGGACTGTGATTCTGTGGACGGTGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCTCGTCTCAGTCACACAGTAGCTGGCAATGCTGGCCTCAATTTCGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcagctgcCGCCGAATCATCCGCTTAACGCTCTTGGCAGCTTCATGGGCATCAGTGGACTACACAGCATTCCAAATCTTCAGCACAGCGATGTTCTTGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTGGGCCTAATGGAACAGGACTATGCAGCAGCGGCACATGCGGCAGCCTTTGGTGCCAACATGTTGCCCACAACGATCAGTTCGGCTTTTCCGCTGCCCCACAAttcggtggcggtggcagcagcggctgcagcATCCTTTGGTCCCGTGCCACCGGCCAGCAATGGCGCCAGCTACAATGGTGCAACAAGTGGTGGGGGCAgtgtggcaacagcagctgtggcAAGTAATAATGGAGGAGGATCAGCTACTGGCGGTGCgggaggaggaggcggagcACCAGCTGGTGGcggaggcaacaacaacagtgcagggagtggcagcaacagtggcaacaacaacaatggtcATCCCTTCTCATTTGCATCGCCAACAGCGCCAAGCGCCAAAGAAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGcTCTATGAAATCAATGATGATCCCAAACGCAAAGAGTTTCTCGatgatttgttttcatttatgcaAAAGCGCGGCACGCCCATTAATCGGCTGCCCATAATGGCCAAATCGGTGCTGGATCTATATGAACTGTACAATTTGGTGATAGCACGCGGCGGTCTTGTCGATGTGATCAACAAGAAGTTGTGGCAGGAGATCATCAAGGGTTTGCATCTGCCATCGAGCATTACCAGTGCCGCATTCACGCTGCGCACCcaATACATGAAGTATCTTTACCCATACGAGTGCGAAAAGAAGAACCTCAGCACACCGGCCGAACTGCAGGCGGCCATCGATGGCAATCGCCGTGAAGGACGTCGCTCCAGCTATGGCCAATATGAGGCCATGCACAATCAGATGCCACTGACGCCCATTTCACGGCCCACACTGCCgggtggcatgcaacaaatgTCGCCATTGGCGTTGGTCACACACGCCGCGGCAGCCAACAATCAACAGGCGCAGGCAGCAGCCGCCGCGGCAGCAGCGCATCGACGATTGATGGGCGGACCGGCTTTTGGCCAGATGCCCAATCTGATGACACAGGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTAATACAGGCCAAGAAGGAGCAAAGTGCTGGCTCAGTGCTTGGCGCCACGCATccccaccagcagcaacagcagcagcagcaacaatcgtTGCATcatcaccagcagcaacagcaacaacaactgcagcagcagcagcaacaacagcagcagcagcgacaacgcTCTCAGAGTCCTGAGTTGAGTACGCGCGATGCGTTGAGTGCACAGGTGGCGCTTTGGCACATGTACCACAACAGCAGTCCAACTGGCTCGGCACACACCTCACCACAGCAACGCGAAGCCTTGAACCTCTCGGACTCGCCGCCGAATCTCAATTTGAGTCACATTAAACGGGAACGTGAACGTGATCCAACACCTGAGCCGGCGGATCATGAGGATGCAGCACATCAACCGCCACCAGCTAAACGTGTTGGCAGCAGCGGTTTGATGCCACCTGGTTTTCCCGCCAACTTTTACTTAAATCCCCACAATATGGCCGCAGTGGCAGCCATAACACAACAccatcatcaccatcagcagcagcagcaacaacaggatGCAGCATCCGAAGGTGAGCCTGAGGATGATTACGGCAATGCTGAGCACAATACCACGGGCAATTCATCGTCAATGAACGATGACAATGAGCCACAACAGTTGAATGGACACCATGACCATCTacaccatcaccatcatcatcagcagaaTCATTTGGATAAGTCGGATGATTCGGCCATTGAGAACTCACCCAGCACTTCCACAACGGCATCCGCATCCGGTGGACACCGTCACAGCTCGCCAGTCTCCACAAAGAaaaagaacagcaacagcaacaacagcagcagcagtaaagcACAGTCAAGTTGCAAGGATGCACAACACGATGGTTGCACAACCAACGGCGGTGGCAAGTTGAATCCCCTCGAGACACTCAGTCTGCTTTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCGGCGAGAATGGTGAGCAGCAGTTGGTTGTCAACCTGGAGCTAAACGGCATTAAGTACACGGGTGTCCTGGTCGCCAATGCACTCACCACTGAACCAAGGGTCGAAGCTAACGATGCGGCAAGTGTGGATGCCACAAACGACGAAGAGGAACCAGCGCCTGACGACGAGGTCAAGCATGATAATAGCCAGGAAGTCAATAGTCAGAGCGAACCAATTGACGAGGAcacggagcagcagcagcccacgGAGGACATTGTGAATGGAGTGGGTGGAGTGGGCGTGGGAGGCAGTGGTGGTGGGGAGTCAACTATGGGCATAACACTGATTAAAGAAGCTGTGGTCAGTTCATAA
- Protein Sequence
- MHKKAKTGPAIATVNSPQYKRSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGNAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGISGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHNSVAVAAAAAASFGPVPPASNGASYNGATSGGGSVATAAVASNNGGGSATGGAGGGGGAPAGGGGNNNSAGSGSNSGNNNNGHPFSFASPTAPSAKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPTLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLMTQEIENRMMEYLQLIQAKKEQSAGSVLGATHPHQQQQQQQQQSLHHHQQQQQQQLQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPNLNLSHIKRERERDPTPEPADHEDAAHQPPPAKRVGSSGLMPPGFPANFYLNPHNMAAVAAITQHHHHHQQQQQQQDAASEGEPEDDYGNAEHNTTGNSSSMNDDNEPQQLNGHHDHLHHHHHHQQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKNSNSNNSSSSKAQSSCKDAQHDGCTTNGGGKLNPLETLSLLSGMQFQVARNGTGENGEQQLVVNLELNGIKYTGVLVANALTTEPRVEANDAASVDATNDEEEPAPDDEVKHDNSQEVNSQSEPIDEDTEQQQPTEDIVNGVGGVGVGGSGGGESTMGITLIKEAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- -
- 80% Identity
- -