Dhis018980.2
Basic Information
- Insect
- Drosophila histrio
- Gene Symbol
- retn
- Assembly
- GCA_958299025.2
- Location
- OY729167.1:19024626-19043053[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-26 1.1e-22 80.5 0.0 2 89 317 402 316 402 0.96 2 2 2.1 4.1e+03 -1.5 0.6 6 40 555 596 534 611 0.60
Sequence Information
- Coding Sequence
- ATGTGCAACCTTATAAGCCACAAAGAAGATGGAGATGAACATGGTAATGGCTTGAATGAAGGGAGATCCCACGGCGATCGAACGGATGACGAGATGAGGGACTGCGATTCCGTGGACGGGGAACATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCTCGTCTCAGTCACACAGTCGCCGGCGGCGTTGGTCTCAATTTCGCCAGTCCGGAGCAGCAAACAGATCTGTCACTCAGccatcatcatcagctgcCTCCGAATCATCCGCTCAATGCTCTTGGCAGCTTCATGGGCATCAGTGGACTACACAGCATTCCAAATCTACAGCACAGCGATGTTCTAGAGAAGCTCAAGATGCAAGTGCGTGACATGAAAGTTGGTCTCATGGAACAGGACTATGCAGCGGCGGCACATGCGGCAGCCTTTGGGGCCAACATGTTGCCCACAACGATCAGCTCGGCTTTTCCGCTGCCCCACaatgcggcagcagcagcagcagcagcggcggcggcagctgcgTCCTTTGCGCCCGTGCCACCTGTTAGCAATGGCGCCAATTACAATGGTGCGGCAAGTGGAGGAACTAAtgtggcagcaggagcagcagcagcagcagttaacACGGCCAGCAATAATGGAGTgggaggaggaggcggaggaggaggtggtggAAGCGCAGCAGTAGGAGGCAACAATAACACTGCAGtgagtggcaacaacaacaacaacagcagcaacaacaacagcaacaacaatggacaTCCCTTCTCATTTGCATCGCCAACAGCGCCAAGCGCCAAAGAAGCGCGCCACTTTACAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGATGATCCCAAACGCAAGGAGTTTCTCGAtgatttgttttcatttatgcAAAAGCGCGGCACGCCCATCAATCGGCTGCCCATAATGGCCAAATCGGTGCTGGATCTCTATGAACTGTACAATTTGGTGATAGCACGCGGCGGCCTTGTCGATGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGATTGCATCTGCCCTCGAGCATCACCAGTGCCGCATTCACGCTACGCACGCAATACATGAAGTATCTCTATCCGTACGAGTGCGAGAAGAAGAACCTCAGCACTCCGGCCGAGTTGCAGGCGGCCATTGACGGCAATCGTCGTGAAGGACGTCGCTCCAGTTATGGCCAATACGAGGCCATGCACAATCAGATGCCGCTGACGCCCATTTCACGCCCACCACTGCCGggtggcatgcaacaaatgTCGCCATTGGCGCTGGTCACACACGCCGCGGCAGCCAACAATCAACAGGCAcaggcagcagctgcagcggcggcagcgcaTCGTCGATTGATGGGCGGCCCCGCTTTTGGCCAGATGCCCAATCTGGTGACCCAGGAGATTGAGAATCGTATGATGGAGTATCTGCAGCTAATACAGGCCAAGAAGGAGCAGAATGCTGTTCCCGGGCTTGGCGCCACACATCcccaccagcaacagcaacagcagcagcagcaacagtcgctgcatcaccatcaacagcagcagcagcaacagcaacaactgcagcagcaacagcagcaacaacaacaacagcgacaacgcTCGCAGAGTCCCGAGCTGAGCACACGCGATGCGTTGAGTGCGCAGGTGGCGCTGTGGCATATGTACCACAACAGCAGTCCAACTGGTTCGGCCCACACCTCGCCACAACAACGCGAAGCGTTGAACCTCTCCGACTCACCGCCGAATCTCAATCTGAGTCACATTAAACGCGAACGTGAACGGGATCCAACACCTGAGCCGGCGGATCATGAGGATGCACCGCATCAGCCGCCGCCAGCCAAACGCGTGGGCAGCGGACTGATGCCACCTGGTTTTCCTGCCAACTTCTATCTGAATCCACACAACATGGCCGCCGTGGCAGCCATCACCCaacaccatcatcatcatcagcagcagcagcagcaacaacaggacGCAGCGTCCGAGGGTGAGCCGGAGGATGATTACGGCAATGCGGAACACAATACAACGGGCAACTCATCGTCCATGAACGATGACAATGAGCCACAACAGCTGAATGGACATCATAACCACCTacaccatcaccatcatcatcatcatcagaatCATCTGGACAAGTCGGACGACTCGGCCATTGAGAATTCACCCAGCACTTCCACAACGGCATCCGCATCCGGCGGACATCGTCACAGCTCGCCGGTGTCCACAAAGAAGAAGAGTGTGGGCAGTAAAGGACAGTCGAGTGTCAAGGATGCAGAGCTCGAGAATTGCACGACCAATGGCGGTGGCAAGTTGAATCCCCTCGAGACACTCAGCCTGTTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGAACCGGCGCCAATGGAGAGCAGCAGTTGATTGTCAACCTGGAGCTGAACGGCATTAAGTACTCGGGTGTGCTGGTGGCCAATGCAGTCAGCAGCACAGACCAGAGAGGACTCGAAGACTCGGACACGGATATGGCTACGGCTACGGCTGCGGCAAATGTGGCTGCCATGTCCGAGGAAGCGGCAACGACTGACGAGGCTAACAATAATGCGGCCCAGCACGATAATGGCCAGGAAGTTGGCCAGAACGAGGCAATTGACGAGGAGACGGAGGAACGGCCCACAGATGACATTGTCAATGGAGTGGGCGGGGCGGGCAATGGGGGTGCTGTGGGCGTAACCTCGCTGCTTAAAGATGCTGTGGTCAGTTCATAA
- Protein Sequence
- MCNLISHKEDGDEHGNGLNEGRSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGVGLNFASPEQQTDLSLSHHHQLPPNHPLNALGSFMGISGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHNAAAAAAAAAAAAASFAPVPPVSNGANYNGAASGGTNVAAGAAAAAVNTASNNGVGGGGGGGGGGSAAVGGNNNTAVSGNNNNNSSNNNSNNNGHPFSFASPTAPSAKEARHFTANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQNAVPGLGATHPHQQQQQQQQQQSLHHHQQQQQQQQQLQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPNLNLSHIKRERERDPTPEPADHEDAPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAITQHHHHHQQQQQQQQDAASEGEPEDDYGNAEHNTTGNSSSMNDDNEPQQLNGHHNHLHHHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSVGSKGQSSVKDAELENCTTNGGGKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGVLVANAVSSTDQRGLEDSDTDMATATAAANVAAMSEEAATTDEANNNAAQHDNGQEVGQNEAIDEETEERPTDDIVNGVGGAGNGGAVGVTSLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- -
- 80% Identity
- -