Dpse009074.1
Basic Information
- Insect
- Drosophila pseudotalamancana
- Gene Symbol
- retn
- Assembly
- GCA_037075185.1
- Location
- JBAMCK010000663.1:543534-558920[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-26 9e-23 80.5 0.0 2 89 284 369 283 369 0.96 2 2 2.3 3.7e+03 -1.6 0.2 11 44 520 561 505 572 0.57
Sequence Information
- Coding Sequence
- ATGCGCGACTGCGACTCCGTTGACGGTGAACATCATCAGCTGAGCGCCAAGGCTGCAATTGCAGCCCGGCTCAGTCACACAGTCGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCGGAGCAGCAAACAGATCTGCCACTCAGCCATCATCACCAACTGCCGCCGAACCATCCGCTCAATGCGTTGGGCACCTTCATGGGCATCGGCGGACTACACAGCATTCCAAATCTGCAGCACAGCGATGTTCTCGAGAAGCTCAAGATGCAGGTCCGTGACATGAAAGTGGGTCTCATGGAACAGGATTATGCGGCAGCGGCACATGCGGCCGCCTTTGGGGCAAACATGCTGCCCACAACGATCAGCTCGGCCTTTCCGTTGGCACACAATTCGGTGGCAGCCGCCGCGGCAGCTGCATCCTTTGGCTCCGTGCCACCGGCAAGCAATGGCGCCAATAGCTACAATGGAGGCGCCGCCAGTGGAGTTGCAAACATTGGAGTTGGAGCAGCTGGAGTTGGCAACAATAATGGATCCGGCGCTGGTGGAACAGGTGGAGGCAGCGGCAATgccaatgcaacagcaactggtggcaacaacaacaacaacaatggcagcaacaataataacaacaacaacaacaacaatggtaGTGGAGCCAATGGGCATCCCTTCTCGTTCGCATCGCCAACAGCGCCAAGCGCCAAAGAAGCGCGTCACTTTGCAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGATGATCCGAAGCGCAAGGAATTTCTCGAtgatttgttttcgtttatgCAAAAGCGCGGCACGCCCATCAATCGGCTGCCCATAATGGCTAAATCGGTGCTGGATCTGTACGAATTATATAATCTGGTGATAGCGCGCGGCGGTCTCGTCGATGTTATCAACAAAAAGCTGTGGCAGGAGATTATCAAGGGGCTCCACCTACCATCGAGCATCACCAGCGCCGCCTTTACGCTGCGTACACAATACATGAAGTATTTGTACCCGTACGAATGCGAGAAGAAGAACCTCAGCACACCGGCCGAGCTGCAGGCGGCCATCGATGGCAACCGACGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCGATGCACAATCAGATGCCACTGACACCCATTTCGCGACCTCCGCTGCCTGGTGGCATGCAACAGATGTCGCCTTTGGCCTTGGTCACACACGCCGCAGCGGCCAACAATCAACAGGCGCAGGCGGcggcagccgccgcagcagcgcaCCGTCGACTGATGGGCGGTCCGGCCTTTGGCCAGATGCCCAATCTGGTGACGCAAGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTCATACAGGCCAAGAAGGAGCAGAGCGCTCCAGTGCTGGGCGCCTCCACACTtaaccaccagcagcagcaacagcagcagcaacatcagcagcagcaacagcaacagtcgctgCACCatcaccaacagcagcagcagcagcagcagcgacagcgctCCCAAAGCCCAGAGATGAGCACGCGGGATGCGTTGAGTGCGCAGGTTGCTCTGTGGCACATGTACCACAACAGCAGTCCAACCGGCTCGGCGCACACCTCACCACAGCAACGCGAAGCCTTGAACCTATCCGATTCGCCGCCAACTCTCAATCTGAATCACATAAAACGCGAACGTGAACGCGATCCCACGCCGGAGCCGACGGACCAAGAGGACTCGCCCCACCATCCGCCGCCAGCGAAGCGGGTGGGCAGCGGCCTGATGCCGCCCGGTTTCCCAGCAAACTTTTACTTAAATCCACACAACATGGCCGCCGTGGCAGCCGCCGCGGGCTTCCATCAccaggccaacagcagcagccatcaTCATctccatcagcagcagcagcatcagcagcagcaacagcaacagcaacaagacgCGGCGTCCGACGGCGAGCCAGAGGATGACTACGGCAATCCAGAGCACAATATAACCGGCAATTCCTCGTCCATGCACGATGACAGCGAACCGCAGCAGCTGAACGGGCATCACGaccatcatcaccatcaccatcatcataaTCAGAATCATTTGGATAAGTCTGATGACTCGGCCATTGAGAACTCACCCAGCACTTCCACCACGGTGTCGGCATCGGGCGGCCATCGTCATAGCTCGCCGGTTTCCACCAAGCAGAAAGGCGTCTCCAGCAAGGCACAGTCCAGTTCCAAGGACACGCAGCACGACAACTGCACAGCCGGCGGCACCGGCAACGGcagtggaggtggaggtggagctggagctggaggtggaggcggaggcgtCAAGCTAAGCCCCTTCGAGACCCTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCGCGAACGGCGAGCAGCAGTTGATTGTCAATCTGGAGCTGAATGGCATTAAGTACTCGGGCATGCTGGTGGCTAATGCAGCCGGGCCAGACCGCAGCGAGGACCCGCACCCGCACCCGGACCCCGACACCGATACGGACACGCCCACTGCGCCCAAGGGCGGAGGCGTAGCCGAGGAGCCCGAGCACGAGGAGGTCAGCAATGCAGTTGCCCACGAATGCAGCCAAGATGTCGGCCAAACCGAGCCAATCGACGAGGAAGCGCTGCAGCCCACAGATGAAATTCTGAATGGCAACAGCGGGGGCCTAGGCGTGGGTGTAGGAgtaggtgtgggtgtgggtgggggtgtggcTGTGGGTGTGAGTGGTGTAGGAGTGGGGGTGGGGTCGCTGCTAAAAGATGCTGTAGTCAGCTCGTAA
- Protein Sequence
- MRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGTFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLAHNSVAAAAAAASFGSVPPASNGANSYNGGAASGVANIGVGAAGVGNNNGSGAGGTGGGSGNANATATGGNNNNNNGSNNNNNNNNNNGSGANGHPFSFASPTAPSAKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQSAPVLGASTLNHQQQQQQQQHQQQQQQQSLHHHQQQQQQQQRQRSQSPEMSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDQEDSPHHPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSSSHHHLHQQQQHQQQQQQQQQDAASDGEPEDDYGNPEHNITGNSSSMHDDSEPQQLNGHHDHHHHHHHHNQNHLDKSDDSAIENSPSTSTTVSASGGHRHSSPVSTKQKGVSSKAQSSSKDTQHDNCTAGGTGNGSGGGGGAGAGGGGGGVKLSPFETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYSGMLVANAAGPDRSEDPHPHPDPDTDTDTPTAPKGGGVAEEPEHEEVSNAVAHECSQDVGQTEPIDEEALQPTDEILNGNSGGLGVGVGVGVGVGGGVAVGVSGVGVGVGSLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- -
- 80% Identity
- -